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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007441 ID=TCONS_00007441|Name=TCONS_00007441|organism=Clytia hemisphaerica|type=transcript|length=928bp
CTTTTTCCTGTTATCGATTTCGATTATGACTATATCGAGCTTTGTCATca
gttgtttttcaaattttcatcacGCTGCATTGTCCCATGTCCATTCAAAA
AATCTGACTATGGTTTGATATCGCCAAGAACGTTCCAAAATTTTGATGCT
CGAAAGACTAATTTTAAAGATGCAAGATATTTTTCACAATCTTTGGAATC
TTGCTTTCCTGATTTGACCGAAAGAGTTCGATTTTGCAACAAATTCTTTC
AATGCTTTTTGTGTTGGCAGCTGGTTGGAGGGAAAAATAGTGGTAAAACG
TCATGGTCAAAAGTGTTCTTTGGGTTGATGGCCAAAGAAAAAATTGCCGT
TCTTTCAAAGGAGGAGCATTTTGGAGCATCAATGATCCAAGACGACACTG
AGCTTCTTTGGGTAgatgaatggaaaaaaaaagaTGTTGTCGGAAGACAC
TTTGAAAACCAAGATGCAGGGTGGGTCCTTTTGCCAATCTGTCAAACACA
AAAACCCAAAAATGCAAAACATGCAGGCAGGAGTGTACATAACATGCAAC
AAAATACCAGATTACGGCAACaaacaagaaaatgtcaaaCTGCGCCTCTA
CATTTGTCgaacaaaaaaacttaaaagaacCTGTCTCGATGCACCGAGGT
GGATCCAAGAAAATGCCATGCAGTGTCTTTTATGGCTGGCACTGTTTATT
AATCAAAACATCGAACATGTTGAGCCGGAAGAAAGGTTTTATGAACGCGC
CAAGGACGTCAGTGCTAAGGCAACAGTGACAAAGAATGTCCCCAGGCATA
TTCTCAAACAAATACGAACTGACACCCTATTTAATCCAAAAATACCCGCA
GTCCCGGCTCCAAAAGACAGTGATAATGCAGACTTTTCCGATTTCCAACG
ACCATGCACATCAATTTCTCTTTCGGAC Run BLAST on NCBI transcript from alignment at sc0000077:47168..48372+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007441 ID=TCONS_00007441|Name=TCONS_00007441|organism=Clytia hemisphaerica|type=transcript|length=1205bp|location=Sequence derived from alignment at sc0000077:47168..48372+ (Clytia hemisphaerica)
CTTTTTCCTGTTATCGATTTCGATTATGACTATATCGAGCTTTGTCATca
gttgtttttcaaattttcatcacGCTGCATTGTCCCATGTCCATTCAAAA
AATCTGACTATGGTTTGATATCGCCAAGAACGTTCCAAAATTTTGATGCT
CGAAAGACTAATTTTAAAGATGCAAGATATTTTTCACAATCTTTGGAATC
TTGCTTTCCTGATTTGACCGAAAGAGTTCGATTTTGCAACAAATTCTTTC
AATGCTTTTTGTGTTGGCAGCTGGTTGGAGGGAAAAATAGTGGTAAAACG
TCATGGTCAAAAGTGTTCTTTGGGTTGATGGCCAAAGAAAAAATTGCCGT
TCTTTCAAAGGAGGAGCATTTTGGAGCATCAATGATCCAAGACGACACTG
AGCTTCTTTGGGTAgatgaatggaaaaaaaaagaTGTTGTCGGAAGACAC
TTTGAAAACCAAGATGCAGGGTGGGTCCTTTTGCCAATCTGTCAAACACA
AAAACCCAAAAATGCAAAACATGCAGGCAGGAGTGTACATAACATGCAAC
AAAATACCAGATTACGGCAACaaacaagaaaatgtcaaaCTGCGCCTCTA
CATTTGTCgaacaaaaaaacttaaaagaacCTGTCTCGATGCACCGAGGT
GGATCCAAGAAAATGCCATGCAGTGTCTTTTATGGCTGGCACTGTTTATT
AATCAAAACATCGAACATGTTGAGCCGGAAGAAAGGTTTTATGAACGCGC
CAAGGACGTCAGTGCTAAGGCAACAGTGACAAAGAATGTCCCCAGGCATA
TTCTCAAACAAATACGAACTGACACCCTATTTAATCCAAAAATACCCGCA
GTCCCGGCTCCAAAAGACAGTGATAATGCAGGTGAGCTATTTTTCATTAT
ATATACTTTATTTCTAATGCTGCAAGCagtcaaagttttcaaaaaacttt
aagCAACAtgaattcttttcttttcccCTAGCTCTGTGACCATAGTAATT
CGCCAACTAAAAAAACCCTTACACCCATGCCCAAAGAAGAAAAGACACag
tattttctttgtattttggTGTTAGGGCTTTCAGCACTGAGAATACAAAG
GGCAAAGGATTGTAGTTCAGTCTTCTCTTCAAACTATCCTTTAAATATCA
ATTCCTAGACTTTTCCGATTTCCAACGACCATGCACATCAATTTCTCTTT
CGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007441-exon-sc0000077-1491911889:47168..48048 | TCONS_00007441-exon-sc0000077-1491911889:47168..48048 | Clytia hemisphaerica | exon |
| TCONS_00007441-exon-sc0000077-1510915933:47168..48048 | TCONS_00007441-exon-sc0000077-1510915933:47168..48048 | Clytia hemisphaerica | exon |
| TCONS_00007441-exon-sc0000077-1575043694:47168..48048 | TCONS_00007441-exon-sc0000077-1575043694:47168..48048 | Clytia hemisphaerica | exon |
| TCONS_00007441-exon-sc0000077-1491911889:48326..48372 | TCONS_00007441-exon-sc0000077-1491911889:48326..48372 | Clytia hemisphaerica | exon |
| TCONS_00007441-exon-sc0000077-1510915933:48326..48372 | TCONS_00007441-exon-sc0000077-1510915933:48326..48372 | Clytia hemisphaerica | exon |
| TCONS_00007441-exon-sc0000077-1575043694:48326..48372 | TCONS_00007441-exon-sc0000077-1575043694:48326..48372 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000077 | supercontig | sc0000077:47168..48372 + |
Blast
The following BLAST results are available for this feature:
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