TCONS_00007091 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007091
Unique NameTCONS_00007091
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4408

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007091 ID=TCONS_00007091|Name=TCONS_00007091|organism=Clytia hemisphaerica|type=transcript|length=4408bp
CAACACCATTTTAACCAAATTTCGTTCGACCCACCAAACTACGGTACAGT
ATGCACATAAAATAATAACAAACCAATAGGACAATGGCAGACCCACCACC
TCCTGCATACGATGAAGCAACCACTCAACCAAATGCTCCTCCCCCACAAG
GGGTTGTCCCTTATCCCCAGCCTGGCGCTCAGTACCCTCCACCTGCAAGC
TACCCACCACCAGGTGGTCAATACCCACCACCAGGAGCTCAATACCCTCC
ACAGGGTGCTCAATACCCACCACCAGGAGCTCAATACCCACCACCAGGAG
CTCAATACCCTCCTCCAGGAGGCCAGTACCCACCACCAGCTGCACAATAC
CCACCTGCAGGAGCCCAGTATCCTCCTCCCGGACAATACCCACCACCAGG
ACAGTATCCACCTCCTGGAGCTTATCCACCACCAACTCAAGTTGAGATGG
TTGCCTTAAATACAGGCGGTAACCCTGCACTAACAACGGAAGGGCCTCCT
ACTTACAATGCGATTGAAGGAGGAACGACAGGAGAGGCGAAAGTAACAGA
AACAACAGCTGCAGCAGAGGACTCGTCAGATAGCGAGACATctgTGTTTG
GTGCCTTCATTGGGATGTTGGTTTTCGCAGCAATCCCGTGTGCTATGATT
TACTTAGGATACACGCACCTTGGAGGATGTCCTGTACGAGAAAACGTTCC
CTTGTTTTGTTTGCTCAGTGGTGTTTTAGCATTGGTGGCGTTCGTTAGTT
TCTTCTTTGTGATGTTATGTGATGACGACTCAAGTTGCTCCAACTTCTGG
CTCGGCTGTTTCGGCCTCTTCATTGTGGCCCATTTTGGGGTCCAGTGTTG
GGGCAGTTATTTGGTGTTCCGCTATTGGCCAACATGGAATGCATATGAAG
AATTTATCGTGGTGAACGATTTATGTGATAAAGACACTTACTTGATGTCT
TTCTCCACACTAATCATCTATTGGATCCTCACACCTTGTCTTTACTCCAT
TGGAAAAGCAGGCTAAAAAGAAAACGGAGGAATTACGTAATTATGGTATA
AATAATAAAACATCTTTGTGTACTTGCTGTTCTTCAATATGAAAGAATGG
AACAAAAAAAACGAACAGACCATTGAAATTGTTTAAAGCATGATcgagct
cttccagaaaaaaagtcGTTTATAGGGGGTGGAAGACATTTTCTCCAGGG
GTAATGGAAAGATTGTGAAAAACCGCCATTTCCAGGGTCAAAACACGTGG
CAAGGGATGGTGGGGAATGGCTAAAAATTGAAGTGTTCAGGCGCATATCA
TTAAAACAATATTATAATATTCTTCACCCCATTAacagattttttctgga
atattcTATGAGCTTCATATCATTATTATCAATTTGTACAATATTGTAGC
TTTTGTACAAATGATGGTCAGAACAAAACATATTTATTATAAGAAGGtga
cccagccggcacacaacgtcaaaacaacatcCAATTGACATTCATAacat
ccaaataacgttatttgaacgttaaaacaacgttgttgCCAGCTGGTGAG
TAAAGTAATCAATTACTAATACTAACGTTCTTATAAATTAACCTACTCGC
ATAATTGACCCAGATGGCTTGTGGTATAGATTAGCTTCTCATTCGGAATA
AAAGctatattgggcttttccagaaaaaaatttgaatatggaaggggggt
ggaggatataacattttttgaaaatttacaccCCGGACACTGTGAATTTT
GACTCCCTGGACAGCAGGTCTAaacccccccggacaagcattagttggcc
gaatatcaaaattaccttcaaacagagcaaaattaccctcaaaccaGCTC
AAACAGCAAGTTTACCCCTTTGACAagacaaattttgtagatttttcact
acccccggacactatatcctccaccccccccccccccNGGGGttgaggat
ataacattttttgaaaatttacaccCCGGACACTGTGAATTTTGACTCCC
TGGACAGCAGGTCTAaacccccccggacaagcattagttgGCCGAATATC
AAagttaccctcaaacagagcaaaattaccctcaaacagcaTTTTTACCC
CTCTGACAagacaaattttgtagatttttcactaccccaggacactatat
cctccaccccccatgtacggacattttctggaagagcccattatcaGAAA
GCATAAGAAAATAGTTTATGcattttctttttagtttaaaacatttaaaa
cattcTGACGATTTTTCGTACATATCTTGTTGGAGTCGATTCCTAATCTC
Ttagaaattgtatattttttgattttttctataaattggtgaaaatttta
TAGATATTTTTGTAGCTCGAGAAAAATAGTAATTATTTCTCAGTTAATCT
TTGTATTGTTTAACCTTatagaggccccccagcggtaactctgatcacga
tatcacgcattttttggtcttcaatcacgatcacgcaaatcagcaaaaaa
aaaaaatggacaatcacgcatccctttgaaaaagttcaaattacgtatac
tcaaaaatctttcaaataacGATCAAgttttgacctctcatcacgcaatc
acgaagaaaaaatttccaaatcacataatcacgctgcaaaaaaagtccct
atcacgtcatcacgaaaaccgcttgggggCCTCCTTATATATGTCAAAAT
TTGGGTGTTAGATAAGCAGCAATTCTCAAAAGTCAAAGATCAAAGCTAAG
ATACAAAATCATCATATTTCATATGAAAAATTACTACAAAACTATACTGT
TTACTTAAATAAAgtgcaaaataaaaaacaaaaacaaataattagaaata
aatatttcaacaaAACACTTATCACCTCTTCAAGTGAAAATGTAAAGAAG
agccaaataaaaaagacaattcTATCCAAATAATTTAAACCTAACTTAAT
AAATAAAAACGAATCATGTTTCTAAACAAAGATTGGAAATAAATTCAATA
GGTGTTATAAATTAGCTGAACGATGGATTtatcaaaatgataaaaaattg
tcTATACAAAATCATCATATTTCATATGAAAAATTACTACAAAACTATAC
TGTTTACTTAAATAAAgtgcaaaataaaaaacaaaaacaaataattagaa
ataaatatttcaacaaAACACTTATCACCTCTTCAAGTGAAAATGTAAAG
AAGagccaaataaaaaagacaattcTATCCAAATAATTTAAACCTAACTT
AATAAATAAAAACGAATCATGTTTCTAAACAAAGACTTTGGAAAAATTTA
TCAGTTCATAAAGAGTCAGGGCTCTAAacaacggtcggacatcggacatt
gtccgacccaaatagcttcatgtccgacccaaaaatcataattttcaagc
taaagcaaccctgatcggacattttgtccgacccacttgaaatcgttatt
tcgagccttgaaAGAGGAACATTATAAGAGTTTATGCCTCCTCAAACTGA
GCAGATATTTTATTCATACTGTACGctattattttatatttatcttGATG
AAAAATCACTCAATGTCCTCAAATCTGATCATATTAAAAGTTCTATATCA
ATCTCAGCCATACTGTTTCGCGTCAGCATTCGGCTATTGCCAAGGCAAAT
GCCGACGAAAATTTAGCTTTTGCTAACGTAAAAGTGCTTAttgtaataaa
attttaaaattttttgtcgACCCAAATAACTCTGAATTAGAAAGGCTGCA
ATTTTATATCCTGAACTGATCttcataaaaatgataatttaatgaaaata
aaggtatCCACAGTGCAATGCAAACTGTCCAGATTTCAAAACagaattat
ttaatttttgattccATTTTCTTGTCCATTGTGAAGTGCATCCTCATCAA
AGGACATAGGTAGCAAGTGTGACAAGGTTGTTTCTTTAGTATCTCTATCT
AAATTAaccaaaattatatcaatattTCCAAACTCTGCCATAAATTGTCG
ACAGGCTCCACAAGGAGAAACCATACTGCCATTTTTAACATCTGTCGCAA
TAGCAATAGCTTTAAATTTTGTGATACCTTCACTAATAGCCTTGCAATAT
GCAGTTCTTTCTGCACATATTGTTAACCCAAAACTAACATTCTCAACATT
ACATCCTGTGATTGTTTTACCACATTGTGATAAAAGCGCACATCCAACTC
GAAAATTACTATATTTTGCATAAGCAAAATCTTTAGCTGAAATACTTGCT
TCAATTAAAgcatttttatctgtttctCCGAGTGTcatcttgttgttttt
taataTCAAActaaagaaatgaaataaaacatCGATATGAAATATCATCT
TTCATTCTTAGTAGGATACatgcgttttttataagaatagtgtttttcTG
GCTGAGGG
Run BLAST on NCBI

transcript from alignment at sc0000073:646087..653021-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007091 ID=TCONS_00007091|Name=TCONS_00007091|organism=Clytia hemisphaerica|type=transcript|length=6935bp|location=Sequence derived from alignment at sc0000073:646087..653021- (Clytia hemisphaerica)
CAACACCATTTTAACCAAATTTCGTTCGACCCACCAAACTACGGTACAGT
ATGCACGTAAGACTTTTTTCTAGTTTCTGCAGGTCATATTTTCCATTTTT
GTATCTTTTGTGTTCCAGTTAATTCTATTTGCGGTTGGTTCACAATGTCA
CTTTCCATGATGTCTGTTTTCAGATTTAAATAACAACTTTGAGAGATTGG
TGATGGTCAAGACTAACAGCGAAAAATGTCTGAAAAATGTCACTCTCTTT
TCTCTTTGAGAATTCCAACTCTTTCTACCGGTTGTACTTATTAGGGGATA
TAACTTTTGCAATAAATAAGCTGGTATATAATACGAAATTTTTTTATTGC
GAGCAGAAATTCCTTCCATAGCAAATTATAAAAAATTATATCGGGCAAGT
AATAATCTTTTCAACCGATTTTTTGACGTCAAGTATGAGAAAGATGTTAC
AAGAGGTAGAAGTGACATTAAAATGTATTGAGCATCGATCTTCATTCTTC
ATTTAAAAGATTCAAAGGCTTCAAATTTTAATTTTCTAACTATTTAGATA
AAATAATAACAAACCAATAGGACAATGGCAGACCCACCACCTCCTGCATA
CGATGAAGCAACCACTCAACCAAATGCTCCTCCCCCACAAGGGGTTGTCC
CTTATCCCCAGCCTGGCGCTCAGTACCCTCCACCTGCAAGCTACCCACCA
CCAGGTGGTCAATACCCACCACCAGGAGCTCAATACCCTCCACAGGGTGC
TCAATACCCACCACCAGGAGCTCAATACCCACCACCAGGAGCTCAATACC
CTCCTCCAGGAGGCCAGTACCCACCACCAGCTGCACAATACCCACCTGCA
GGAGCCCAGTATCCTCCTCCCGGACAATACCCACCACCAGGACAGTATCC
ACCTCCTGGAGCTTATCCACCACCAACTCAAGTTGAGATGGTTGCCTTAA
ATACAGGCGGTAACCCTGCACTAACAACGGAAGGGCCTCCTACTTACAAT
GCGATTGAAGGAGGAACGACAGGAGAGGCGAAAGTAACAGAAACAACAGC
TGCAGCAGAGGACTCGTCAGATAGCGAGACATGTAAGTCATTTTTTCTTC
TGTTTTTCAAGAGTAACTTAAAGGAAGAAATTTTGGCGGGAATTTAATTT
GGCGGATGGCCGAAAAAGTTTTTTCAGAGGGAATTTAATTTGGCGGATAG
CTGGATAAAGTAATTTTGACGGGAATTTAATTTGGCGGTTGCAGGATATT
TTTTACCAAAAGCGTTATCAAATAAGCAAAAAAACCTGTTTTAAGGTTTG
AAATAGCACAAATTTGGGGAATGCGTGAAATAAATTAAATTTGGCGGGAA
TTTAATTTGGCGGATGGAGGAAAAAATAAATTTTGGCGGGAATTTAATTT
GGCGGATGGAGGAAAAAATAAATTTTGGCGGGAACTTAATTTGGCGGATT
TTGGCGAAATCCGCCAAATCCGCCAAATTTTCTTTCCGCCAAAATTTCTT
CCTTTAAGGTAGAAATTTTTGGTTGCTGTAAAATATTGTGAACACTCAAA
GATGATATAATTGTAACAGCTGCTGAGAAAAGATTAACGGTATAAAACTT
TCTACAAATTATTTGTACATTAATATCGAGTGAGAATCATTTTAGTAGTA
CGATAAACATTCTAAAGCTTCATTAAGAAATTGACTCTCGAATTTTCAAT
ATAAGTTAATTTTCATCAGTAAGGAATATCTGTCAAGACTTACATTTAAT
TAAGTCGCGTTTTCGATTCTAATATTCGACATCTACAGCACTATATCCTA
AGAAAAAGAAAAATGCCATTTAGTTACCAAGAAAATCGATTTTTTTTATA
AAATGTTGTTTTTATTTTTTCAGCTGTGTTTGGTGCCTTCATTGGGATGT
TGGTTTTCGCAGCAATCCCGTGTGCTATGATTTACTTAGGTAACAAATAT
TTTGTTTATTATAGACAGCTCTTTCAGGAACAAAGCTCATCTTCCACAAA
ATGTAATACTAGATATAGTATCATCTCAAAAATATCTCCCTAACATGAGC
ATAAGATGCATCTCTAACATTTCTCTTACTTTTGAAAAAAAAGAAATAAA
GTATTTTTGACTTAGGCAGACCCAAACTCTCTTTTGGATTAAAATGCTAA
CAACCAACTCTTCGTAAGAACAGGTCGGATAAAGTCAAATGCTCATGGTA
ACTGCAAACTCGGCTCACAGATTGCTTTTGCCATCATTTGGCCTCATTCC
ATCCGACAAAACTAGAATCCAATCCTATTGTGGTGTTAGGGTTGAATTGA
AAGCTGTACACGTTTTTTTATAAGAACATCCAAAATAGTAGAATCCTTCT
GATGTTTTTAACTTTTTGAGATTTAAGCCTTAAAAATGCTGTTATTTCCA
CCATTTTGTGGGTATTTTTGTCCGTTTTCCCAAAAGAAATTGGGTGTTTT
AGAGTCCTCAAAGCCTTAAAATGTTCTTAACTTGTTCTTAACATTTTGGC
CATTGAAGCCTTATGTTCTTATATAGTTTGTTCTTATAAAAACGTGAATA
TAAATGCTCAGTACAAACCCTATCTACCCTTGAAATGCGCAAGGACTGGG
TTAGAGTTTGGGTATGATTGATGTCAAATGTCTGAAATCGTTGACGTCAA
AATGTTCTGGTAAATAAACGCTTTAAGGGTTGTTATTGGACCATCTTCGC
ATGTAACAGAATGAAGCCATTCTATTGGTTAGAAGTGACTAGTCACTAGT
AGAATGGCTTACGGAACCGAAGTGTGTGAACGTGGTCTTAGTCTTAACCG
CAGACATCTTATAAAACACTAGATAGAGCTACACAGTCCCCATTTGATTC
AAAATTATCCGCCATCTCTGATAAGTAGACCATAGCTCGGTGCCGGTAAT
TTGATCGATCAAGCTTATCTTTCGCCTCGTCGCTTCGCGCCATTCAGGAT
TTTTGCTTGGTTGAACAAATTGCTGGTACCGAACTGTGGCCTACTGTGAC
CTACTTTCAGCAAAGATGGTGCATTAGTTTGCTTCACTTGGGAAATACAG
AGTAGCTCTATCTAGTGTTTTATATGAGATATTTGTGGTCTTAACCAGTG
ACATAAATGGTGACTTTATTGTTTTAGGATACACGCACCTTGGAGGATGT
CCTGTACGAGAAAACGTTCCCTTGTTTTGTTTGCTCAGTGGTGTTTTAGC
ATTGGTGGCGTTCGTTAGTTTCTTCTTTGTGATGTTATGTGATGACGACT
CAAGTTGCTCCAACTTCTGGCTCGGCTGTTTCGGCCTCTTCATTGTGGCC
CATTTTGGGGTCCAGTGTTGGGGCAGTTATTTGGTGTTCCGCTATTGGCC
AACATGGAATGCATATGAAGAATTTATCGTGGTGAACGATTTATGTGATA
AAGACACTTACTTGATGTCTTTCTCCACACTAATCATCTATTGGATCCTC
ACACCTTGTCTTTACTCCATTGGAAAAGCAGGCTAAAAAGAAAACGGAGG
AATTACGTAATTATGGTATAAATAATAAAACATCTTTGTGTACTTGCTGT
TCTTCAATATGAAAGAATGGAACAAAAAAAACGAACAGACCATTGAAATT
GTTTAAAGCATGATCGAGCTCTTCCAGAAAAAAAGTCGTTTATAGGGGGT
GGAAGACATTTTCTCCAGGGGTAATGGAAAGATTGTGAAAAACCGCCATT
TCCAGGGTCAAAACACGTGGCAAGGGATGGTGGGGAATGGCTAAAAATTG
AAGTGTTCAGGCGCATATCATTAAAACAATATTATAATATTCTTCACCCC
ATTAACAGATTTTTTCTGGAATATTCTATGAGCTTCATATCATTATTATC
AATTTGTACAATATTGTAGCTTTTGTACAAATGATGGTCAGAACAAAACA
TATTTATTATAAGAAGGTGACCCAGCCGGCACACAACGTCAAAACAACAT
CCAATTGACATTCATAACATCCAAATAACGTTATTTGAACGTTAAAACAA
CGTTGTTGCCAGCTGGTGAGTAAAGTAATCAATTACTAATACTAACGTTC
TTATAAATTAACCTACTCGCATAATTGACCCAGATGGCTTGTGGTATAGA
TTAGCTTCTCATTCGGAATAAAAGCTATATTGGGCTTTTCCAGAAAAAAA
TTTGAATATGGAAGGGGGGTGGAGGATATAACATTTTTTGAAAATTTACA
CCCCGGACACTGTGAATTTTGACTCCCTGGACAGCAGGTCTAAACCCCCC
CGGACAAGCATTAGTTGGCCGAATATCAAAATTACCTTCAAACAGAGCAA
AATTACCCTCAAACCAGCTCAAACAGCAAGTTTACCCCTTTGACAAGACA
AATTTTGTAGATTTTTCACTACCCCCGGACACTATATCCTCCACCCCCCC
CCCCCCCNGGGGTTGAGGATATAACATTTTTTGAAAATTTACACCCCGGA
CACTGTGAATTTTGACTCCCTGGACAGCAGGTCTAAACCCCCCCGGACAA
GCATTAGTTGGCCGAATATCAAAGTTACCCTCAAACAGAGCAAAATTACC
CTCAAACAGCATTTTTACCCCTCTGACAAGACAAATTTTGTAGATTTTTC
ACTACCCCAGGACACTATATCCTCCACCCCCCATGTACGGACATTTTCTG
GAAGAGCCCATTATCAGAAAGCATAAGAAAATAGTTTATGCATTTTCTTT
TTAGTTTAAAACATTTAAAACATTCTGACGATTTTTCGTACATATCTTGT
TGGAGTCGATTCCTAATCTCTTAGAAATTGTATATTTTTTGATTTTTTCT
ATAAATTGGTGAAAATTTTATAGATATTTTTGTAGCTCGAGAAAAATAGT
AATTATTTCTCAGTTAATCTTTGTATTGTTTAACCTTATAGAGGCCCCCC
AGCGGTAACTCTGATCACGATATCACGCATTTTTTGGTCTTCAATCACGA
TCACGCAAATCAGCAAAAAAAAAAAATGGACAATCACGCATCCCTTTGAA
AAAGTTCAAATTACGTATACTCAAAAATCTTTCAAATAACGATCAAGTTT
TGACCTCTCATCACGCAATCACGAAGAAAAAATTTCCAAATCACATAATC
ACGCTGCAAAAAAAGTCCCTATCACGTCATCACGAAAACCGCTTGGGGGC
CTCCTTATATATGTCAAAATTTGGGTGTTAGATAAGCAGCAATTCTCAAA
AGTCAAAGATCAAAGCTAAGATACAAAATCATCATATTTCATATGAAAAA
TTACTACAAAACTATACTGTTTACTTAAATAAAGTGCAAAATAAAAAACA
AAAACAAATAATTAGAAATAAATATTTCAACAAAACACTTATCACCTCTT
CAAGTGAAAATGTAAAGAAGAGCCAAATAAAAAAGACAATTCTATCCAAA
TAATTTAAACCTAACTTAATAAATAAAAACGAATCATGTTTCTAAACAAA
GATTGGAAATAAATTCAATAGGTGTTATAAATTAGCTGAACGATGGATTT
ATCAAAATGATAAAAAATTGTCTATACAAAATCATCATATTTCATATGAA
AAATTACTACAAAACTATACTGTTTACTTAAATAAAGTGCAAAATAAAAA
ACAAAAACAAATAATTAGAAATAAATATTTCAACAAAACACTTATCACCT
CTTCAAGTGAAAATGTAAAGAAGAGCCAAATAAAAAAGACAATTCTATCC
AAATAATTTAAACCTAACTTAATAAATAAAAACGAATCATGTTTCTAAAC
AAAGACTTTGGAAAAATTTATCAGTTCATAAAGAGTCAGGGCTCTAAACA
ACGGTCGGACATCGGACATTGTCCGACCCAAATAGCTTCATGTCCGACCC
AAAAATCATAATTTTCAAGCTAAAGCAACCCTGATCGGACATTTTGTCCG
ACCCACTTGAAATCGTTATTTCGAGCCTTGAAAGAGGAACATTATAAGAG
TTTATGCCTCCTCAAACTGAGCAGATATTTTATTCATACTGTACGCTATT
ATTTTATATTTATCTTGATGAAAAATCACTCAATGTCCTCAAATCTGATC
ATATTAAAAGTTCTATATCAATCTCAGCCATACTGTTTCGCGTCAGCATT
CGGCTATTGCCAAGGCAAATGCCGACGAAAATTTAGCTTTTGCTAACGTA
AAAGTGCTTATTGTAATAAAATTTTAAAATTTTTTGTCGACCCAAATAAC
TCTGAATTAGAAAGGCTGCAATTTTATATCCTGAACTGATCTTCATAAAA
ATGATAATTTAATGAAAATAAAGGTATCCACAGTGCAATGCAAACTGTCC
AGATTTCAAAACAGAATTATTTAATTTTTGATTCCATTTTCTTGTCCATT
GTGAAGTGCATCCTCATCAAAGGACATAGGTAGCAAGTGTGACAAGGTTG
TTTCTTTAGTATCTCTATCTAAATTAACCAAAATTATATCAATATTTCCA
AACTCTGCCATAAATTGTCGACAGGCTCCACAAGGAGAAACCATACTGCC
ATTTTTAACATCTGTCGCAATGGCAATAGCTTTAAATTTTGTGATACCTT
CACTAANATTTTTAACATCTGTCGCAATAGCAATAGCTTTAAATTTTGTG
ATACCTTCACTAATAGCCTTGCAATATGCAGTTCTTTCTGCACATATTGT
TAACCCAAAACTAACATTCTCAACATTACATCCTGTGATTGTTTTACCAC
ATTGTGATAAAAGCGCACATCCAACTCGAAAATTACTATATTTTGCATAA
GCAAAATCTTTAGCTGAAATACTTGCTTCAATTAAAGCATTTTTATCTGT
TTCTCCGAGTGTCATCTTGTTGTTTTTTAATATCAAACTAAAGAAATGAA
ATAAAACATCGATATGAAATATCATCTTTCATTCTTAGTAGGATACATGC
GTTTTTTATAAGAATAGTGTTTTTCTGGCTGAGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003963XLOC_003963Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007091-exon-sc0000073-1575043694:652966..653021TCONS_00007091-exon-sc0000073-1575043694:652966..653021Clytia hemisphaericaexon
TCONS_00007091-exon-sc0000073-1575043694:651940..652474TCONS_00007091-exon-sc0000073-1575043694:651940..652474Clytia hemisphaericaexon
TCONS_00007091-exon-sc0000073-1575043694:651083..651148TCONS_00007091-exon-sc0000073-1575043694:651083..651148Clytia hemisphaericaexon
TCONS_00007091-exon-sc0000073-1575043694:646513..649894TCONS_00007091-exon-sc0000073-1575043694:646513..649894Clytia hemisphaericaexon
TCONS_00007091-exon-sc0000073-1575043694:646087..646455TCONS_00007091-exon-sc0000073-1575043694:646087..646455Clytia hemisphaericaexon
TCONS_00007091-exon-sc0000073-1510915933:652966..653021TCONS_00007091-exon-sc0000073-1510915933:652966..653021Clytia hemisphaericaexon
TCONS_00007091-exon-sc0000073-1510915933:651940..652474TCONS_00007091-exon-sc0000073-1510915933:651940..652474Clytia hemisphaericaexon
TCONS_00007091-exon-sc0000073-1510915933:651083..651148TCONS_00007091-exon-sc0000073-1510915933:651083..651148Clytia hemisphaericaexon
TCONS_00007091-exon-sc0000073-1510915933:646513..649894TCONS_00007091-exon-sc0000073-1510915933:646513..649894Clytia hemisphaericaexon
TCONS_00007091-exon-sc0000073-1510915933:646087..646455TCONS_00007091-exon-sc0000073-1510915933:646087..646455Clytia hemisphaericaexon
TCONS_00007091-exon-sc0000073-1491911889:652966..653021TCONS_00007091-exon-sc0000073-1491911889:652966..653021Clytia hemisphaericaexon
TCONS_00007091-exon-sc0000073-1491911889:651940..652474TCONS_00007091-exon-sc0000073-1491911889:651940..652474Clytia hemisphaericaexon
TCONS_00007091-exon-sc0000073-1491911889:651083..651148TCONS_00007091-exon-sc0000073-1491911889:651083..651148Clytia hemisphaericaexon
TCONS_00007091-exon-sc0000073-1491911889:646513..649894TCONS_00007091-exon-sc0000073-1491911889:646513..649894Clytia hemisphaericaexon
TCONS_00007091-exon-sc0000073-1491911889:646087..646455TCONS_00007091-exon-sc0000073-1491911889:646087..646455Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:646087..653021 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0975311	0.0107278	0.0493784	0.100931	9.8884	8.64237	5.57504	15.5881	7.41481	3.24676	11.2306	2.06943	21.3614	20.3171	14.0849	9.58257	14.7015	13.9966	30.2411	18.0834	16.7559	8.90228	3.68043	9.7849	24.927	25.7473	64.5753	45.6869	6.74022	11.5586
Blast
[Close]
BLAST of TCONS_00007091 vs. Swiss-Prot (Human)
Match: CDD (Cytidine deaminase OS=Homo sapiens GN=CDA PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.245e-29
Identity = 66/144 (45.83%), Postives = 83/144 (57.64%), Query Frame = -1 
Query: 3872 KNNKMTLGETDKNALIEASISAKDFAYAKYSNFRVGCALLSQCGKTITGCNVENVSFGLTICAERTAYCKAISEGITKFKAIAIATDVKNGSMVSPCGACRQFMAEFG-NIDIILVNLDRDTKETTLSHLLPMSFDEDALHNGQ 4300
            K    TL       L+  S  AK  AY  YS+F VG ALL+Q G+   GCN+EN  + L ICAERTA  KA+SEG   F+AIAIA+D+++   +SPCGACRQ M EFG N  + +   D      T+  LLP SF  + L   Q
Sbjct:    4 KRPACTLKPECVQQLLVCSQEAKKSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAVSEGYKDFRAIAIASDMQD-DFISPCGACRQVMREFGTNWPVYMTKPDGTYIVMTVQELLPSSFGPEDLQKTQ 146
The following BLAST results are available for this feature:
BLAST of TCONS_00007091 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDD1.245e-2945.83Cytidine deaminase OS=Homo sapiens GN=CDA PE=1 SV=... [more]
back to top