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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006828 ID=TCONS_00006828|Name=TCONS_00006828|organism=Clytia hemisphaerica|type=transcript|length=917bp
ATGATTTTAAAAAGCCTATATAATGTGATATTTTGTGGCTacagttaaaa
aaatttattcccacgtcccaaaatgacaaaaatttcttttgtatttgaAA
CGAAATTTCTAGTGATCTTCAGTGGCTAGTAATTAGCCTTTAAAGTGTGT
GAAAGATTGTGGCTAATTTTTCGAGTGGCTAATTCTACCAACTAATTTCA
AAAAGGTGTAGCAACTTCAATTTAAAAGATCAGTCAcccaaattttgcac
aagttacattgaataataaaattttgagattatGTGAAAAAATGTGGGAT
ATTGATCCTTGAAAGTGAAATAATGTGGTTAATAGACTTAAAATGCACCC
AGAGACAAaagtattgaataaaaaagtctaATCGtggaatttgaaagttt
tttgcttgagatgatacttattgaatggttttgttttcattttctgagGA
TACAGCATCAGAAATGTGAATTTTAAGTGGCTAAATATTCCTTGCAATTG
CGATGTTTGACTTGAGGAAAAACGTTTCAACAGGCATTTTACGTACTGAC
TTTAGCCACCATGTAAAAAAGCTGTAGTTATAAGATTTTGGGATATTGTG
CTAAATATGTGGCTAATTccatagaaatactttttgtaaCACTTCCTGTA
tgattttgtgttaaaatgtgTGGCTATTTGCATACTTACTAACTAGTACG
AgtagtttttcttcattttaagcctaatttatAAATTTCCCCTGTCATGT
TTTATTGCCACAATTAATCACatatcaattttaaagaaaggCATGCAAGG
TATCAAAAGAAAGCCAATGGAATTTTCGAAAGTTTAGACAAGGTTATGTT
TTTCACTCGCGTCGTGAAAAAATGTGGGTAGCCTTTTTAATACTCCGGAA
ATTTTAGTAAGTCATTT Run BLAST on NCBI transcript from alignment at sc0000070:415025..415941 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006828 ID=TCONS_00006828|Name=TCONS_00006828|organism=Clytia hemisphaerica|type=transcript|length=917bp|location=Sequence derived from alignment at sc0000070:415025..415941 (Clytia hemisphaerica)
AAATGACTTACTAAAATTTCCGGAGTATTAAAAAGGCTACCCACATTTTT
TCACGACGCGAGTGAAAAACATAACCTTGTCTAAACTTTCGAAAATTCCA
TTGGCTTTCTTTTGATACCTTGCATGcctttctttaaaattgatatGTGA
TTAATTGTGGCAATAAAACATGACAGGGGAAATTTataaattaggcttaa
aatgaagaaaaactacTCGTACTAGTTAGTAAGTATGCAAATAGCCAcac
attttaacacaaaatcaTACAGGAAGTGttacaaaaagtatttctatggA
ATTAGCCACATATTTAGCACAATATCCCAAAATCTTATAACTACAGCTTT
TTTACATGGTGGCTAAAGTCAGTACGTAAAATGCCTGTTGAAACGTTTTT
CCTCAAGTCAAACATCGCAATTGCAAGGAATATTTAGCCACTTAAAATTC
ACATTTCTGATGCTGTATCctcagaaaatgaaaacaaaaccattcaataa
gtatcatctcaagcaaaaaactttcaaattccaCGATtagacttttttat
tcaatacttTTGTCTCTGGGTGCATTTTAAGTCTATTAACCACATTATTT
CACTTTCAAGGATCAATATCCCACATTTTTTCACataatctcaaaatttt
attattcaatgtaacttgtgcaaaatttgggTGACTGATCTTTTAAATTG
AAGTTGCTACACCTTTTTGAAATTAGTTGGTAGAATTAGCCACTCGAAAA
ATTAGCCACAATCTTTCACACACTTTAAAGGCTAATTACTAGCCACTGAA
GATCACTAGAAATTTCGTTtcaaatacaaaagaaatttttgtcattttgg
gacgtgggaataaatttttttaactgtAGCCACAAAATATCACATTATAT
AGGCTTTTTAAAATCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006828-exon-sc0000070-1491911889:415025..415941 | TCONS_00006828-exon-sc0000070-1491911889:415025..415941 | Clytia hemisphaerica | exon |
| TCONS_00006828-exon-sc0000070-1510915933:415025..415941 | TCONS_00006828-exon-sc0000070-1510915933:415025..415941 | Clytia hemisphaerica | exon |
| TCONS_00006828-exon-sc0000070-1575043694:415025..415941 | TCONS_00006828-exon-sc0000070-1575043694:415025..415941 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000070 | supercontig | sc0000070:415025..415941 . |
Blast
The following BLAST results are available for this feature:
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