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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006501 ID=TCONS_00006501|Name=TCONS_00006501|organism=Clytia hemisphaerica|type=transcript|length=951bp
TTCAcattcagtttcaaaattcgTGCATTTTTCACACAGAGAAAATATAC
AAAGTCCTTTTTACACTAAAAGTATTTAATTTCAGTGTAAGCCAGCCCAT
AaatcactttcacttttcaaGCTTTTCctttgaagcctaaaaacagaTGA
TAGATAGACTCCCCTCCACGCCCACAATCACCACTAGCAGCACCAACATT
ACAACCCCACATGAAAAGACAGGAGGAAGACACAGTCAAAAGAAATAGAG
TTACATTCTGTAATGTGAAGTTCCTAAACAAGCTTCAAAATGGCATCTGG
GTTTAATTGGAGGTCCGAAGATTTCTCGGAACCTTTTGACCCCAATAATT
TTGTTGAAAGAATATCTGCAAACATAGATGGTGGAGGTACCAAAGGAGGT
CAGGAAGGTTTCGATCCTGTCAAGCTGAAGAATCATTTCCTAGAAACCAT
CAAGAGTTTGCAGCAACTCAGTGAGAAGACTGATGCACAGATTGTAAAGC
TAGAACAAGTATGCAAAGACCAAgaacaaaaacacaaagaaaatacTTTG
GAAGTTGAAAAACAATACAAGACTGCCATGACTCAGTTCCATGACTTGGA
TGACAGAATCAATTCAGTAGCCACAAAAGTGGTTCATTTGGGTGACCAAT
TAGAAAACATTAGTATCCCTCGTCAAAGGGTTCAAGAAACGACACAAGTC
ATGAAATATTTCGAGGAATTTCACCCAGGGAAAGAACTATCTCCAATATT
TAATGACAAAAGCaagCTCCATGAGGCAGCAAATCTGATTTGTCAATTGT
TGATGGTGGCAGATGAACTCCCCAAAGATCAATTCGAAAGAGTATATCGA
AAGATTTTAGAGAAATACTCGACAATCGAAAGTGATTTGCAACGTGAGTT
TGTCCACGCATACAAAGATGGTAACTTAGAAGTGATGGCCAAATGCGCTA
A Run BLAST on NCBI transcript from alignment at sc0000067:342557..359345- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006501 ID=TCONS_00006501|Name=TCONS_00006501|organism=Clytia hemisphaerica|type=transcript|length=16789bp|location=Sequence derived from alignment at sc0000067:342557..359345- (Clytia hemisphaerica)
TTCACATTCAGTTTCAAAATTCGTGCATTTTTCACACAGAGAAAATATAC
AAAGTCCTTTTTACACTAAAAGTATTTAATTTCAGTGTAAGCCAGCCCAT
AAATCACTTTCACTTTTCAAGCTTTTCCTTTGAAGCCTAAAAACAGATGA
TAGATAGACTCCCCTCCACGCCCACAATCACCACTAGCAGCACCAACATT
ACAACCCCACATGAAAAGACAGGAGGAAGACACAGTCAAAAGAAATAGAG
GTATTCTTTTTCTCTCTTTTAGCTGGTAGCTATTGGCTATAAACTATAAG
TAAGTAAGTTTGTGTGACACCTCGCTCAGTCAGTTAGGAAAACCATCCAG
GATCCTGCCATTCTATGAGCCAGCAAAAACTAAATGACACTTGTAAACTT
AAGTTTCTTACCATTTTCCATCGAAAACAACCAAAAACATTGCTACTTCC
CAAAGCCGGAGATCAAAACAAATTATCTTCCAAGATTATGGCGCCCTTTT
GGATCTATTGTTAAGGCCATCTAAAATGGTGGAAAGAGTTGCGGAAAGAC
AAAGGCGCTCGCTGCGCGTCGAGGGTGGTAAAGCCAAAACGCCCAATATG
ATCTTCCAACAGAAGGCAAGTTAGTTGCCGCGCGAGTTACGTCATGCACT
CCACCGCAGCGCATAACGAAGCGTGTTTAAATGAATATCATTAATTATAA
GAATAACTTATGTGCTTACTTTCAGTAAACTTTGAGTTCTTCATTGAAGA
TGAAGAAGGTAAGAAGATAAAAAATGCACTGGATAATTTTCATTGTAACA
GTTTGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNATACTTACTATGTTTGCTACATCGTCTAGGCTAAA
AAAAGTGCGAAAAGACACGAACGCCATTTTTTATTGAGTGACGTTATGAT
TTTTTTTATTGCGGCTGCGTACAGGAACTCGCCAAATGTTCCTAACTGTC
AGTGCCATGGCCCCTCCACTTTTTTGCAAAGCAAAATAAAAAATTTCTCT
TCACCTAATGATCTTTTTCTTTTCTGTGCGCGTGCCAATAAAAACGTTAG
AACCTTATGAGGGACGACCCTGCCTATGCCCCGGACAGTCCGGGTTTTTT
TTGATGCGTGTCCGGGGTCCGTATTACCGTGAGAGGTCCTAAAGCCGACA
GCCCAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTAATTGACATCTTGACATTACAGCTATCTTGTTAGATGT
TTTGTTTCGAGAGTTCTAGCAATAGTTTATCGTTCAACTTGGAGAGGGAA
TGTTTGTAAACATGGAATTTTTTTTCATAACAGTTATTTGGGGGGTCGGA
ATTAGGCTGGGCTGTCGGCTTTAGGACCTCTCACGGTACTTGTTTTTGAG
AGACTACCCCGGACGCCCCAGACAGCCTGCGCGGTCGCTTTTTATAGAAT
CGCTGACCGCGCGGGCTTTTTTCGGGGTAAATTTATGGCGCAAAAATTGG
AGCCCCGGACGTAGGTCCGGGGAAAAAGTTATTTTTTTCAGACCCCAGAC
ATTTGCCCCGGACTGTCCGGGGCATAGGCAGGGTCGTTATGAGGGGGGGT
TCGGCTCATAATGCATAGCTGTCAACTCTCCCGCATGTCAACGATTTCTC
CCGCGTGAAGAAAATTCTGCCAAATCTCCCGCAATTTTGGGATTTTCTCC
CGCATCTCCCGCATTTCCAAAAATTTTCNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGATTTCCCGATTTTC
CGATTTTGAAAAATCGGATTATCGGGGAAAATTTTTCCGACTTGGAGCTC
TCCCGCATTTTTGTGAGGCGAAGTTGACAGCTATGCATAATGCCGGTCCG
GACTAGTCGTTGTGGGTCAGGTCGGCCGCCGACTTTCGAAGGTTGTCGTG
GGGTCGGGGCGGCGCCCTTCGAAAGTCGTCGTGGGTCGGGGCGGCGCCCT
TCGAAAGTCGTCGTGGGTCGGAGCGGCGCCCTTCGAGAGTTGTCGTCCGA
CCAGGGAGTCGTTGGGAGGGACATTGTGGGAGCCTCTCTTTCATTTTATT
CGTCCTCAATTTAATCTAATTAATTAGATCTAGTCTTTAAAATATCTGTC
ATATTTTTCTCGAGAGTCGTCGTTGGGCCGCCGTCCCTCGAGAGTCGTCG
TTGGTCCGCCGTCCTTCGAGAGTCGTCGTTGGTCCGTCGTCCCTCGAGAG
TCGTCGTTGGTCCGCCGTCCTTCGAGAGTCGTCGTTGGTCCGCCGTCCTT
CGAGAGTCGTCGTTGGTCCGCCGTCCTTCAAGAGTCGTCGTTGGTCCGCC
GTCCCTCGAGAGTCGTCGTTGGTCCGCCGTCCCTCGAGAGTCGTCGTTGA
TCCGCCGTTCAAGCCTCCATCAATCTGATGCAAATATTTATAGTTTAATC
AGAAGTTTGAGATTACTAAGTATTTCCAAATTAAATTGGCTAATTTTTCC
TAAAACCTTGTGCCATTTTCTCGTGTTTGATAAAGAATTAGGAAAACCTG
AAAAAAACCTACAGCTAGCTATAAGCAAAAAGCTTGTACCCAAAAATTTT
TTAAATGTCAAAAAATGAAGGTCTTCAAATCTCTCTAAAACCTATTTTTA
TGGGAAGCTATGGTATTTTGTAGCAAAAAGCAAAAAAAATAGAGCTTAAC
CTTGCTTTAGAAATTTTTTATTGCATTTTTTAGGTTTTTGTAAAACCGCA
GGCCAAAATAGGAGAAAAAATCATCAAGTTTTGCATTTTCTTCTCATTGA
CTTCATTTTTAACCCCTACTTTTAACCATTTTTGAAATCTACATAAAATT
TCCGACAATTTGATATATAACATGCACATGTTCCCGAAAAATCAACATAA
TAGGCTAAATTNAATGGGTCATTTTTTAGGCCGAAATCCAAAAATACCGG
AATATTAATTTGAAAATAACCCTATCATGTTATATATCAGTGGAAGCGGA
ATTTAGAGTAGATTTTGAATATCCAAGTTTCATGTCCTGAAAAAGAACTC
AACTCAAATTATTATGCTTTAACAGCTAAAAATAGACATGGGTACAAGCT
TTTTGCTTATGGCTAGCTTCCTATAGTGTAGACTACGATGAGTCAGTTCA
ATCACTGCAAAATAAGTTTACCAAAATTGGACANATGATTTGAGGCTTTC
AAATCCATTTTTTCACTGACTAGTACTAGGTCAGAGTTTTTGTCACGCCG
TGACGGAAAATTTTCAATAGCCTGTAAAAATCTATGATAGTGAAATCAGG
TCTTAATTTACTCCATGAAACATCAACCATATAGTGTTAATCAGAAACCT
AAAAAAGAAATTCAAAAATCAACTCACAAGATTTTCTCNAGAATTTCAAT
CTCTTCACAATTTGGATGGGTGGGTGGTCCATCAACTCTAATGACGTGTG
ATTCACTGATCGCCTTAGTGATAATAAACACTGCGTAAATTATAAGGCTT
GCTTCACTTTTCTTGTCTGAGAAAGGCTAAAAATTCAATTCTAGCCCTTC
GGGCTTATACTTAATTGGTTTTAACAACAACTCTCGAAGGTCGCCGCACT
GTTCGCCGCTCCCAACCACGACTCTCGAAGGTCGCCGCACTGTTCGCTGT
CTCCAACAACGACTCTCGAAGGTCGCCACACTGTTCGCTGTCCCCAACCA
CGACTCTCGAAGGTCGCCGGACTGTTCGCCGTCCCCAACCACAACTCTCG
AAGGTCACCGGGCATTCGCCGTCCCCAACCACAACTCTCACTCTCGAAGA
TCGCCGGACTGTTCGCCGTCTCCAACCACGACTCTCGAAGGTCGCCACAC
TGTTCGCTGTCCCCAACCACGACTCTCGAAGGTCGCCGGACTGTTCGCCG
TCCCCAACCACAACTCTCACTCTCGAAGGTCGCCGGACTGTTCGCCGTCC
CCAACCACGACTCTCGAAGGTCGCCGCCCTGTTCGCCGCCCCCAACCACG
CCTCTCGAAGGTCGCCGGACTGTTCGCCGTCCCCAACCACAACTCTCGAA
GGTCACCGGGCATTCGCCGTCCCCAACCACAACTCTCACTCTCGAAGGTC
GCCGGACTGTTCGCCGTCTCCAACCACGACTCTCGAAGGTCGCCACACTG
TTTGCTGTCCCCAACCACGACTCTCGAAGGTCGCCGGGCATTCGCCGTCC
CCAACCACAACTCTCACTCTCGAAGGTCGCCGGACTTTTCGCCGTCCCCA
ACCACGACTCTCGAAGGTCGCCGCACTGTTCGGTGGCTCTCGAAGGGCGG
CGTGGGTATAATTAAGTGATATTTTAAGGACCAGCTAGAAAATATTGAGA
AATAGAAGACCAGAAAAAATTGAAAGAGAGGCTCCCACGACGTCCTGTCC
CACGACCACCTGTCCCACGACGACCTTCGAAGGACGCCGCTCCCACCCAC
GACGACTCTCGAGAGTCAGCGCCCCCAACCACGACATCTTTCGACAGAAA
ATCAGAACAAAAAGGAAGCTGTTTTAGCCAAATAAGACAGGTCAAAATCG
AAAATTTTCTGGCCCGTCGGCGCAAACCGGTTGCACCTCCTTAGTCACTA
TATTTTTGTTGGCCCCCTCACTTTCAAAAATTGTGGCGCGGGCCCTGATT
TTTATTCTATCCGAACTAATGTTAAAAAAGACCAAAGAGGTCCTGACTGA
GTAACGGCTTGTCACTGTGCCGGGTGCATACTCGGCGCCTTGGGGCCGTA
GGGTTGCTAGTAACGGCTCGAATTTCAGTCAGGTTAAAGAAGGTGCAATT
TTACTCATATTATAATAACGTTACCCCCGTCTTTTTTGTCATTCAATAAG
TATTTCCAAATTTTGTATTCTGCTGTGTGAGTGTGGCTCAACAGATAGCA
CGCTGGGTTTCTGATCAGAAGCTCTTTCATTTGGTGGGTTCGAACCCCGG
TTGGGTCGATAATTCAAGGTCAGTTAATCATTTCCAACTTCAACAGAATT
TATTCAGCTTTCTTTTGCAAAAGAAATTATCAATGATGATAGAATGTAAA
GAGATGGAAAAACAGCTTTTCTGATTACTCAAAGTTCAACGATCACTTCT
ATTGAAAACTCTATTGTAAAAACGTTGATTATTACATTAAATGAAAGTCC
AGAAAAGACGGCTCTCCATACAAATCAGACAGTTTCTACATGATTTGATG
ATAAAAATGAAAATTTGTTTTTCCTTTTTTGCCGATTACTAGTTCAATTT
TTAAGAATAAGGAGCAATATTTTTACCAATGTATATAATATAGCAAAAGA
AATTCTTAACGCAATGATATTAAATTGATCCTTGACTGTCAGAAGTCGAG
TAAAATCAAGATGAAGTTATAATTTTCTCGAGCTGTAGCTTTCCATATTA
TGGTGCGGTCATGATTCGGTTATATCAGTAGAATCGCTAGGAAATTCTGA
GCAAGAAGATATAGGTACCTTTTCGTATATGAGAGGTGTACCCAAAATAT
AAGCCCTAAAAGTTAGCGCATAATCAGGCTTGAAACAAAAGAATTTTGTC
ACAACACGCTAATCATGCAGATTTTTTAAAGCGACAACAAAAGAAACCTA
TTTACTCAACATAAACTCCCTTAAGGGCAAGATAGTAAGTCGCACTAGGA
AATTTAGCTTTCAGAAAAAACAACATCAGTCATCTACAGGATGTAATTGT
AACAACAAGGATAAGAGTTACCTGAATCAAGTTCGCAAGACAATTAATTA
AAATTTGAAAGTTTGAAACAAAATAAAACGTGCAGCAACCAAAATCAACC
AACCAAAATTTGTCATTCAATTCCCGAGACAACGCTTCGATTTTTAAGGC
CTAGTTTATACGCTAAAGTAAAAACAATTCCGCACATGTAAATGGGTCAG
TGTTTGAGGTCCGACAAAATTTCTGGGAAATAGCCTATCCGGCAGTGCGC
GGATCTTGGTGAGTTCCGTCTCCTCCGTAGATCTTTTCCTTGGGAAGTTG
ATCTTCAAATTAGTTCTCAAGGTTGGCTTGGCTCAAATTATTTCATCTGG
GTAAAGGCCACATTTTTGGTACACCTGTCCCTTCCGTTACGCTAAAAAAA
TTTCATCCTCAAAATTGCTTAAAACCTATTTATTTGGATGTGTATATACC
TCTATGATGATAATCAAGTATGTGCTCCTCTATATTACCTTTTTGCAGAA
CTGTAGGACCCTAGAAGTTGTCGTGGTTGATTTTTTTCTCACTTTCAACC
AATAACTAAAAACTTGTTATTTCTACAAAAAAAGAGACACTTATAAGACT
AAACTTACTCTTAAAATGTTTCTACAAAGTGTTTTAACCAATTCCTAATC
GTTTTTCATGAATTTACATTTTCGGGTTGGAGGGGTAGCCTAATTTGCGT
AACGGAAGGGACAACTTTCAAATTTTTAATTAACATCTTTACTAGAAAAA
AACTTGTTTCAAAAGATAGTTTGAATTTTAATAGTCAAATATGATCTTTT
AACCTAAAATGATAGAACTAACCAAAACTAACTATATAAACTTACAAATA
CTCCTAAAAATTGTAAATATTAGTTATAGAATAAGCGTAACGGAAGGGTC
AAAATTTGAAAATAGCTCTGTTTTGGGCCATCCAAGCCTCATCCCAAGTT
TTAGATGATTCCTAAAATTTAGGTGACCCACTGTAGGTGACCCCTGAAAC
CGAAAATGTGACTTGCATTTCAGTTTTTCTTTAAAATTTTATATTGAGCA
TTCAAAAAAGAAGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAAAAAGCATTGGGTT
TATTCCCCTTTAAATCAAGTCCTAGGGAGCTGAGACCCAAGCTTTGGGAC
TTGGTATTTTGGCTGTTTCAGGACGCGAAAACACCTCCTATGGAGCCTAA
GGGTTAATGAGACCCCTGGTAAAGATTTTTTTATGGTCAATTAACAACTT
TGAATAACTCCTAATTGTCATTTTCAGGTATTTTGAGCAGTTTGGAGTCT
TCAAAAATAATCAAAAATTTTTTGGTTAACCCTTTGAGTGCGCCGTAGTT
TTGAAAATTTCAATGATTTTTTTTGAAATTTGAAATTTCAAAATGGCGTA
AAAGCTTGTAGCTTTTGTTTCAGACACTTGTTTTGGTACCAACCATTGGA
AAGGTAATTTTATACTCTTTCAAAAACATTTGGTTTCTTTGCCTTTAAAT
AAAGTCCTAGGGAGATAGGAACCCAGCTTTAGGACCTGGTATTTTGGCTG
TTTCAGGACGCGAAAACGCGTCCTATGGAGCCTAAGGTTTAAGAGATAAA
AAGAAGTCATTGTAGTGTAGCAAATGTGAGAACAGTCTACAATAGGTTTT
TCAACAATGCAATAACTTCACATATCTTGGCTTTGAAGAAAGAAACACTA
TAATGAACATCCAAGTCCCTGTAACACTCCCTTTAAAAAAAGGCGTAACG
GAAGGGACAAAACCAAGGCACATTTCCAATGGGAAGGACTGTCAATGAAA
AAACATGTCAAAAATAGAGGATAATGGTTTGCAAATTGAATTTGGAGTAA
TCCCAATGGTAACTTGTGAGAATTTAACATAAACTATAGCTATTTGATAA
AGATTTTTTTGAAAATGAATTTGCGTAACGGAAGGGACAAGATCAGAGTC
GCAAAACATGCTTTTTAGAAAAATGCAAAACCTGAGCAACAGTGAAAAAA
GTATTTACTTAAAATATTGTGAAAACTCGCTCTATCAATATTAGGTGGAC
TGAAAAAAAATTGAAAGTGAATATTTTATCCCAGTTGAAGAAAAATAAAT
TTTGAATCTTATTTTTTTTGCATTTTCGTAGAAAAATGTGAAATTTAGAC
TTCTGCAGGGTCTGTAAGAGGAAAGACTGTCCTATTGCTGGCCAAACTCT
GATTGTAAGGGCACTTTCTACCCCTGATCAATAATCAATTGGAAGTTTTG
CAAGTTTAATGCTAGTTTTCAAGATATGAGCAGTAAAAGTCAAAAGCGTA
ACGGAAGGGACAGGTGTACCAAAAATGTGGCCTTTACCCATCTATGGCTC
AAATTTTAGGCAATTTCTCATAGTTTTTGAGAACGTTAATTTCATTTAAA
AGTGCCGGGTTATTTTTCCATGAATCCCTTTAGAAGTTTTGCGGCGCATT
TTTTGCTTGAGAGTCAGGTAAACAATATAGCGCTTTCGCAGCATTAATCT
TTGATATGCATTTTGGCGGGACGCTAGTGTGACTAACTGCGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAACAAATTTG
TTTTGATAACTCCACCAAGTTTATCAATCATACTTTCTGTCATAACATGT
CACGATAACTTTCACTGATAGCGCGCCCTTTTTAACTTTTTACTTTCATT
AAAAATGACCGGACGCCGATTGGAGAATTAGAGAACCCCTGCCGCCTAAC
CGCCTATCGCCCGACAGGATTAATAAATAACGAGTGTGTAACTTGACGCG
CAAGTGACATCAAACGCTCCATCGTTTTGCCACTAATTTGGTCTTCTTCG
TTCCAGACATGCGCGTGTGTTCGACTACAGATTTTTTTCATATATTTCAA
TTTAAAAGCCTACTCGGTGCGAAAGAGAAATCATGTATTTTTTAATACGC
CGTTCATTGACCCAAATCAAATGACTTTGGAGGTTCGGTGAAATGGTGGG
AAGGCTCGAAATAACAATTTCAAGTGGGTCGGGCAAAATGTCCGATCAGG
GTTGCTTTAGCTTGAAAATTATGATTTTTGGGTCGGACATGAAGCCATTT
GGGTCGGACAATGTCCGATGTCCGACCGTTATTTCGAGCCCTATGGTGGC
CGTCCCATGTTTTGTCAGATAGTCCCAAGTTAGAGCAGTTGACAATACCA
TTTTCACAGGAGTGATTCTTCAATCTTTGACCATCATCNGTTAGAGCAGT
TGACAATACCATTTTCACAGGAGTGATTCTTCGATCTTTGACCATCATCA
CTGTGAAAAACTTTTTCAAAGATATTCATTCAATCAAAAGATATCAAACA
AAGTTTGTTATTGGTTGTTTGACAAAAGGCTGTTTTTTTGTCGTTTTTTA
CTACTTTATAGAGTTCAACCAGCAATAAATTTTGTTTGATATGTTTTGAT
TGAATGAATATTTTTGAAAATTTTTTTCACAGTGATGATGATCTAAGATT
GAAGAACCACTCCTGTGAAAATGGTAATCTTAGCACATTTCCACAAGAAG
TTAATTTTTTTTTTCTTCATTTTTCATTTTCACTTTTCATATTTTTCCAA
TTTTATTTTGCTTGATAATATTCCACTCACAAATATCTTTTCATAACTTT
TCGTAACTTGATTTGAATTCTATCAAAAGATACAGCCATTTTTATCTCAG
CTGCAAATTATTTTGAGACAGACTTTAGTGTTTTTTCAAACAACGTATTG
GAGATAATCAAAGTTTGTCAAAAAATACTGGGTGCTCCATACTCCGAGGT
CCACTTAAAGCTATTTTATAGACTGGATGTTGCAATTTTAAGTGGCCTGG
TAGTATATGGTAATATGCTTTTGCCAGATTTTAGTTGTTCTTGAAAGGTA
AAAATAGAATTGAGAATAAGGGATTGCAAATCTGTTGTTGATGTTTGTTT
CACATTTTTGATTATATTTTTCAACACAACAATTAGCTTTTTTGTTATTA
GGGTTTTTAACATTTTCTTTCTTTTTTTGTTGAAATGATGCTTTTATTCA
TCAATAGAGTGCTTAACCAACCGCAATCAGAAGCGTGTTATGATAGTAAA
GCAGTGTATCAATACTGACAGTGACAAAAATTTCAACTGAGGATTGTTTG
AATAAGACATGAAACTGTCAGTATTGATCAATTGATTGATACAATAATTT
TCACTGCTTCAACTATCTTATTACATTTTCTTTCAAAATGGCAACATTGT
CAAATGCTCCTATTCTACTTGTTCACTGGACTCAGCGCCATTAAAAATTA
TCAATAAACAATGTTTAGCCATCTTGAAGTAGACTTTTGAATACAATTTT
CTCAAACTCCAGAAGAACTCAGTCAGGAGTAGAAAAAGGTTTCTCTGATT
CAATTTTGCATTGTTATTATTTTAGTTACATTCTGTAATGTGAAGTTCCT
AAACAAGCTTCAAAATGGCATCTGGGTTTAATTGGAGGTCCGAAGATTTC
TCGGTAAGTCTGAAAATTAACAATTTGAATTTTTTGAAATTCTTAAAACA
TTTTTCTAAAGGTGAGAAGGCTTCATAAAGGCCATTTTGCCTTTTTCTAC
TGGTATTGGATAAAACAAGATAAACTATAAACTATAAAAAAGTTTAAGCT
GCATGGAAATAGGGCAATTTATTGGATTTTATGGCATTTTGNTTGGAGGT
CTGAAGATTTCTCGGTAAGTCTGAAAATTAACAATTTGAATTTTTTGAAA
TTCTTAAAACATTTTTCTAAAGGTGAGAAGGCTTCATAGAGGCCATTTTG
CCTTTTTCTACTGGTATTGGATAAAACAAGATAAACTATAAACTATAAAA
AAGTTTAAGCTGCATGGAAATGGGCAATTTATTGGATTTTATGGCTTATG
AAACATTTTCTTAATTGTTATATTGTAGGAACCTTTTGACCCCAATAATT
TTGTTGAAAGAATATCTGCAAACATAGATGGTGGAGGTACCAAAGGAGGT
CAGGAAGGTTTCGATCCTGTCAAGCTGAAGAATCATTTCCTAGAAACCAT
CAAGAGTTTGCAGCAACTCAGTGAGAAGACTGATGCACAGATTGTAAAGC
TAGAACAAGTATGCAAAGACCAAGAACAAAAACACAAAGAAAATACTTTG
GAAGTTGAAAAACAATACAAGGTGAGAGAGATATGCTTTCTCATCAACCT
ATATATATTTTGACTTGTTTTTTATTTTGACAATTTTTTTTTTCACTCCG
AGCCACTAAATCATGATTCAAACAAATAAACAACACCAAAATTTTGATTT
TATTAAACAAAGCTTTTCGAGTCTTTACTAACTCATTATTAGGTTTAAAA
AAAAATTAACCTGATGATGAGTTAGTAAGACTTGAAAAGCTTTGTTTTTT
TTTAATAAAATCAAAGTTTTAGTGTTGTTTATTTGTTTGAATCTACACAA
AGAAACTCAGAAGGAGCAATTGATATTCATAAAACACGACCACTATCAGT
ATTGTCTGAAGGAGTACTTTGTTGACCTGAAATCTTAATTTTTTACCATT
TCAGACTGCCATGACTCAGTTCCATGACTTGGATGACAGAATCAATTCAG
TAGCCACAAAAGTGGTTCATTTGGGTGACCAATTAGAAAACATTAGTATC
CCTCGTCAAAGGGTTCAAGAAACGACACAAGTCATGAAATATTTCGAGGA
ATTTCACCCAGGGAAAGAACTATCTCCAATATTTAATGACAAAAGCAAGG
TATTTTGATTTTTTTCTGAACAATTCTTGAAGGGTATGAATTATTCAATA
TGTACTAGTTATCGCATGACTTCGAGTGCAATACGAGAAATATTTTACGA
GTTCCGAGATTTTTCCGTAATATTTTTCCGAGCCTTTAGGCGAGGAAAAA
TATCGGTAAAATCTCGGAACGAGTAAATTATTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTGTTCATCAGATTTGAT
TTTAGTGTCTTTTATGGAAGAACTCCAAAGTAAAAGTTAATCTGAACATA
TTTTTGTTGCGTTTTTCCCTTTGATTCCCAGCAGTTCCCAGCCAAGTCCT
GTATTGTTTTGATTTTTCTCCCGCCGCTTACCCAGTCCCCCAAAGTCAAC
GCGGTCATATTTCCAGACTAAAGAAATATGAAATATCGCAAATATCTCGA
TGCTCTCGACCAATCAAAAAGCTGATATTTTTTTGGGTCGGCAATAATAG
TTTTTATGAGAAGCAGGTCTTTTTACCATGAAAGTTAAAAGCTCAAACCC
ACAACCTTCTGCTAAGGCAAATTATTTTATCTCAATAAAGCTATCAACCC
TTAGTGAGGTGGTCCTCTTTTTTGGGGACTGGTAATAAATTTACATTTTT
AGATCAATTTCTAATTTCCTAATTTCTATAGTGCAAACTATTTTTAGCAT
TTGAATAAGTTTAAAAGTATATCGACATTACTCAATACTTTATTGCTTCA
ATGCAAGGGTATGTTACAATTTTCACAAGAGCACTTCTATACTTGTGTTT
TGGATGCTGTCGTCGAAAAGAATTTTCCTTGCTTTTTCGTTACCAGTCTC
CTCAAAAGATAGTTGTATTCAATGTTAATACCTAGCTAGCACAAGATATG
ATTATTTTAGCGCAATATTGCCCTAGGGATACTACATAAGTCAATTGTAT
TTGAAAGAAGGAAATCTATTTTGTCTTTAGCTCCATGAGGCAGCAAATCT
GATTTGTCAATTGTTGATGGTGGCAGATGAACTCCCCAAAGATCAGTAAG
TCCGTTAATCACCGGCTTTATACCCTTTATACCCTTATACAAGGATTTAT
ACCCCGTTTATACCTATGTGTCAGGAATAATGCTTTCTGTTTTACAATAA
GATTGACTCCTGTTGCAGTCGCTTATAATTCCAGTTACTTTCATTTATTT
TCATTTTGTCTCTTTTTTATAGATTCGAAAGAGTATATCGAAAGATTTTA
GGTAGGTACAGGGTCACCTGGAAAGAAATATGAAATGTGCCGATGTGTTT
ACACCCTCTAAAAAATGAACTGCGGCTTGTTTTTTTGAATATCAAAACTC
TAAAGTACATCAAATATCTTTGTGTTTCAACCAGATGGTTGGTGTTATAT
GCTACTAAGATGATAATTATTTAGGAAAGGGTAAAGGGTAGTCAAGTCGA
TAATGTATGAACTATATACTTAGTCCTTTACTTTTCCTTACCTACCCTAA
TAAATTTAGCCGTGTAGCATGCTAGTTTATCACTTATTTTTATTGTGCTT
ACAAACTAGTTTTCATTTTGTAGGGTTTGATTATTGTCATTGGGCTTAAA
CTAATCTATTTTTGGAAGTTTTATGACCAATCCATCCCTGATATTGATAG
GGAAAAGATTGCATCAGATTATCGTTATTGCTCTTCTTTTCTCTTCAGAG
AAATACTCGACAATCGAAAGTGATTTGCAACGTGAGTTTGTCCACGCATA
CAAAGATGGTAACTTAGAAGTGATGGCCAAATGCGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006501-exon-sc0000067-1575043694:359096..359345 | TCONS_00006501-exon-sc0000067-1575043694:359096..359345 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1575043694:345843..345920 | TCONS_00006501-exon-sc0000067-1575043694:345843..345920 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1575043694:345175..345417 | TCONS_00006501-exon-sc0000067-1575043694:345175..345417 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1575043694:344597..344791 | TCONS_00006501-exon-sc0000067-1575043694:344597..344791 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1575043694:343301..343365 | TCONS_00006501-exon-sc0000067-1575043694:343301..343365 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1575043694:343095..343123 | TCONS_00006501-exon-sc0000067-1575043694:343095..343123 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1575043694:342557..342647 | TCONS_00006501-exon-sc0000067-1575043694:342557..342647 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1510915933:359096..359345 | TCONS_00006501-exon-sc0000067-1510915933:359096..359345 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1510915933:345843..345920 | TCONS_00006501-exon-sc0000067-1510915933:345843..345920 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1510915933:345175..345417 | TCONS_00006501-exon-sc0000067-1510915933:345175..345417 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1510915933:344597..344791 | TCONS_00006501-exon-sc0000067-1510915933:344597..344791 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1510915933:343301..343365 | TCONS_00006501-exon-sc0000067-1510915933:343301..343365 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1510915933:343095..343123 | TCONS_00006501-exon-sc0000067-1510915933:343095..343123 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1510915933:342557..342647 | TCONS_00006501-exon-sc0000067-1510915933:342557..342647 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1491911889:359096..359345 | TCONS_00006501-exon-sc0000067-1491911889:359096..359345 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1491911889:345843..345920 | TCONS_00006501-exon-sc0000067-1491911889:345843..345920 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1491911889:345175..345417 | TCONS_00006501-exon-sc0000067-1491911889:345175..345417 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1491911889:344597..344791 | TCONS_00006501-exon-sc0000067-1491911889:344597..344791 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1491911889:343301..343365 | TCONS_00006501-exon-sc0000067-1491911889:343301..343365 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1491911889:343095..343123 | TCONS_00006501-exon-sc0000067-1491911889:343095..343123 | Clytia hemisphaerica | exon |
| TCONS_00006501-exon-sc0000067-1491911889:342557..342647 | TCONS_00006501-exon-sc0000067-1491911889:342557..342647 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067 | supercontig | sc0000067:342557..359345 - |
Blast
BLAST of TCONS_00006501 vs. Swiss-Prot (Human)
Match: EXOC5 (Exocyst complex component 5 OS=Homo sapiens GN=EXOC5 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.187e-45 Identity = 85/212 (40.09%), Postives = 129/212 (60.85%), Query Frame = 2
Query: 314 SEDFSEPFDPNNFVERISANIDGGGTKGGQEGFDPVKLKNHFLETIKSLQQLSEKTDAQIVKLEQVCKDQEQKHKENTLEVEKQYKTAMTQFHDLDDRINSVATKVVHLGDQLENISIPRQRVQETTQVMKYFEEFHPGKELSPIFNDKSKLHEAANLICQLLMVADELPKDQFERVYRKILEKYSTIESDLQREFVHAYKDGNLEVMAKCA 949
+E F EPF + ++ER+ GGG++GG E FDP +L F+ I+ LQ + E+ ++ KLEQ C+ + ++ + E++K + A F +LD+ I+ VATKV HLGDQLE ++ PRQR E ++MKYF EF G+ S +F + K+ EAA++I +L ++A ELP D+F V KI KY +E L +EF A + G + M + A
Sbjct: 5 AELFEEPFVADEYIERLVWRTPGGGSRGGPEAFDPKRLLEEFVNHIQELQIMDERIQRKVEKLEQQCQKEAKEFAKKVQELQKSNQVAFQHFQELDEHISYVATKVCHLGDQLEGVNTPRQRAVEAQKLMKYFNEFLDGELKSDVFTNSEKIKEAADIIQKLHLIAQELPFDRFSEVKSKIASKYHDLECQLIQEFTSAQRRGEISRMREVA 216
The following BLAST results are available for this feature:
|
