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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006087 ID=TCONS_00006087|Name=TCONS_00006087|organism=Clytia hemisphaerica|type=transcript|length=1152bp
CCGCTGGATATGCTgggatgttggccaaggtgattgcCGCTGGATATGCT
GGAatgttggccaaggtgattgcCGCTGGATATGCTgggatgttggccaa
ggtgattgcCGCTGGGGTGGTGTTTCAAGAGAGTATACTTAGAAATAGTT
GTCTTGAAGACGGAACTGATGAACTACATGGTTGTTTGGTCTAACTTAAA
CTTATCACACCTGACCACTTAACTTATTCTCAAATATTGCATGGCAAGCT
CACTTTGACATTTTGACAAATGTTCCTGTGTAAGGAGAAATAGATATTTC
AAAGtactcataaaaaaaaaaacacatgtttGAAACTTCAATTCAGATGG
GTGGATATTATTATGAGATTCGACAAGAGGATAAGAATTCATGGCTCAGG
CAGAGCTCAAATACTCTCCTTTACATCTATTTTACAATATAATCTTGCAC
TGAGGCCCCCTTTTGGTTTGGATTAAGGTCATTAAGAGGTTAAACTATAC
TTATAATATACTATTATAGTTATTTGATTATATGTTAGCTGGTTTCTGAT
TTATATTTATAACTAACTATATTGACTGAGTGTAAAGCATAGTCATGAAT
TTCTATCTAGAGGCTAGAATGAAGAGGCAGTTTACATAAAGGGTCAACAA
CAagtaatcaaaattttataCAGACAAGTAATGAATTGGGGTGTATCTAG
AGTATTTGTTGATCAActagatttttcttcttcagaagAGGCTGGTTTAA
ATGTACAGAAGGCGAGTCAAGGCAGAAGATTGACAAAAGCCAATACAACT
CAAGTAGAATAACATATGGAAAACTAGGAAATcagtgttttttgttttta
agggTGACAACTTAAAGCTTGGGCATAGAAGATGAGCTAACAATTTTCTG
GAAATATCCCAGACCAAAGTATACACAGAACATCGACCAAAATTAACAGG
CATAAAATGAAAGTTTAAGGGAAAGTTCCGTTTATTTACGCATCCTGCAA
AATCAGTCTTCTTTCTGCAGTAAAATTGAATCTTGGAAAATGATGAAATA
AGTTCTTGGTTAATTCAAAGGCTAGGCCAGTGGCACTCCAGATGTTACAA
TAAATACGAGAGCTTTGTGAGTGTGTTATGTGTGTTTATGTCCCAGGTCG
GG Run BLAST on NCBI transcript from alignment at sc0000062:29957..31108 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006087 ID=TCONS_00006087|Name=TCONS_00006087|organism=Clytia hemisphaerica|type=transcript|length=1152bp|location=Sequence derived from alignment at sc0000062:29957..31108 (Clytia hemisphaerica)
CCCGACCTGGGACATAAACACACATAACACACTCACAAAGCTCTCGTATT
TATTGTAACATCTGGAGTGCCACTGGCCTAGCCTTTGAATTAACCAAGAA
CTTATTTCATCATTTTCCAAGATTCAATTTTACTGCAGAAAGAAGACTGA
TTTTGCAGGATGCGTAAATAAACGGAACTTTCCCTTAAACTTTCATTTTA
TGCCTGTTAATTTTGGTCGATGTTCTGTGTATACTTTGGTCTGGGATATT
TCCAGAAAATTGTTAGCTCATCTTCTATGCCCAAGCTTTAAGTTGTCAcc
cttaaaaacaaaaaacactgATTTCCTAGTTTTCCATATGTTATTCTACT
TGAGTTGTATTGGCTTTTGTCAATCTTCTGCCTTGACTCGCCTTCTGTAC
ATTTAAACCAGCCTcttctgaagaagaaaaatctagTTGATCAACAAATA
CTCTAGATACACCCCAATTCATTACTTGTCTGtataaaattttgattact
TGTTGTTGACCCTTTATGTAAACTGCCTCTTCATTCTAGCCTCTAGATAG
AAATTCATGACTATGCTTTACACTCAGTCAATATAGTTAGTTATAAATAT
AAATCAGAAACCAGCTAACATATAATCAAATAACTATAATAGTATATTAT
AAGTATAGTTTAACCTCTTAATGACCTTAATCCAAACCAAAAGGGGGCCT
CAGTGCAAGATTATATTGTAAAATAGATGTAAAGGAGAGTATTTGAGCTC
TGCCTGAGCCATGAATTCTTATCCTCTTGTCGAATCTCATAATAATATCC
ACCCATCTGAATTGAAGTTTCaaacatgtgtttttttttttatgagtaCT
TTGAAATATCTATTTCTCCTTACACAGGAACATTTGTCAAAATGTCAAAG
TGAGCTTGCCATGCAATATTTGAGAATAAGTTAAGTGGTCAGGTGTGATA
AGTTTAAGTTAGACCAAACAACCATGTAGTTCATCAGTTCCGTCTTCAAG
ACAACTATTTCTAAGTATACTCTCTTGAAACACCACCCCAGCGgcaatca
ccttggccaacatcccAGCATATCCAGCGgcaatcaccttggccaacatT
CCAGCATATCCAGCGgcaatcaccttggccaacatcccAGCATATCCAGC
GG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006087-exon-sc0000062-1491911889:29957..31108 | TCONS_00006087-exon-sc0000062-1491911889:29957..31108 | Clytia hemisphaerica | exon |
| TCONS_00006087-exon-sc0000062-1510915933:29957..31108 | TCONS_00006087-exon-sc0000062-1510915933:29957..31108 | Clytia hemisphaerica | exon |
| TCONS_00006087-exon-sc0000062-1575043694:29957..31108 | TCONS_00006087-exon-sc0000062-1575043694:29957..31108 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000062 | supercontig | sc0000062:29957..31108 . |
Blast
The following BLAST results are available for this feature:
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