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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005584 ID=TCONS_00005584|Name=TCONS_00005584|organism=Clytia hemisphaerica|type=transcript|length=942bp
AAATCATACGTTATTAATCTTTCTTAAGACTAAAAAAATGTCATGCGACG
CAATCTTTAGCACGTCAAACCGTGGTTTTTATCTGGCAGCTACCATCCTA
TTTGGTTTGTCAGGAATTATTACAACCTTGGGAAACACTTTCTCCTTGAT
GGTTCTTTGGCAGCCGTCACAACgatcaaaatcaaacaaaattctAACAT
CGTTAGTAATTAGTGATTGTTTGGTTGGTTTGTTATCAAATCCCATGGCC
ATATTGATGATGTGGACTGGTCTGGAAATTACACCTTCAATTTGTAGATT
AAACACTATAGCACTTTTCTTTGTTACCTGGTTTGGTTCTTCATCAGGCT
TTACAATACTTTTTATTACCTACGATCGCTATATAAGCATCACAAAACCA
TTCAAATACCATGACATTATCACTGATCTCAAAATCAATCTAATTCTTGT
GACGATTTGGGTTGGTAACTCAATAACGGCACTTTTAAATGCAATCAACA
AAATACTTTTCCTGCATTTTCTCAACATTGGTTTTGTCATCGCATCTACT
ATCTTAATCACTGGATATTATCAAATCTGGAAAGCCGTCAAACAACGGCA
AACAAACATCCTATCGGTTAGTAGGAATGACCAAGAACATCTACGGACCC
ATATCCGACTTGCTAAGAAAATCTTATTTCTTATGATCGCGTATTTTGGT
GCTGCCCTCCCAGTAGTTGTTTATGCAATCGTTGTGTTGTATGATCATTT
TACACGCCCTTATCAACCGTACTTGTACGTCGTTGggattttctttgttc
ttttcaaCTCTTGTGTTGACCCTTGCATTTAGGATTCCCTCTTCAATTGA
GAACTTCCCTTCACTCACTAAGCATTCACTTCCCCCGTCAAGGGTTCCAA
TCCTCAATTAAGGATTCCCCTCCCCACTAAGGGCGATCCCTA Run BLAST on NCBI transcript from alignment at sc0000054:415229..416170+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005584 ID=TCONS_00005584|Name=TCONS_00005584|organism=Clytia hemisphaerica|type=transcript|length=942bp|location=Sequence derived from alignment at sc0000054:415229..416170+ (Clytia hemisphaerica)
AAATCATACGTTATTAATCTTTCTTAAGACTAAAAAAATGTCATGCGACG
CAATCTTTAGCACGTCAAACCGTGGTTTTTATCTGGCAGCTACCATCCTA
TTTGGTTTGTCAGGAATTATTACAACCTTGGGAAACACTTTCTCCTTGAT
GGTTCTTTGGCAGCCGTCACAACgatcaaaatcaaacaaaattctAACAT
CGTTAGTAATTAGTGATTGTTTGGTTGGTTTGTTATCAAATCCCATGGCC
ATATTGATGATGTGGACTGGTCTGGAAATTACACCTTCAATTTGTAGATT
AAACACTATAGCACTTTTCTTTGTTACCTGGTTTGGTTCTTCATCAGGCT
TTACAATACTTTTTATTACCTACGATCGCTATATAAGCATCACAAAACCA
TTCAAATACCATGACATTATCACTGATCTCAAAATCAATCTAATTCTTGT
GACGATTTGGGTTGGTAACTCAATAACGGCACTTTTAAATGCAATCAACA
AAATACTTTTCCTGCATTTTCTCAACATTGGTTTTGTCATCGCATCTACT
ATCTTAATCACTGGATATTATCAAATCTGGAAAGCCGTCAAACAACGGCA
AACAAACATCCTATCGGTTAGTAGGAATGACCAAGAACATCTACGGACCC
ATATCCGACTTGCTAAGAAAATCTTATTTCTTATGATCGCGTATTTTGGT
GCTGCCCTCCCAGTAGTTGTTTATGCAATCGTTGTGTTGTATGATCATTT
TACACGCCCTTATCAACCGTACTTGTACGTCGTTGggattttctttgttc
ttttcaaCTCTTGTGTTGACCCTTGCATTTAGGATTCCCTCTTCAATTGA
GAACTTCCCTTCACTCACTAAGCATTCACTTCCCCCGTCAAGGGTTCCAA
TCCTCAATTAAGGATTCCCCTCCCCACTAAGGGCGATCCCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005584-exon-sc0000054-1491911889:415229..416170 | TCONS_00005584-exon-sc0000054-1491911889:415229..416170 | Clytia hemisphaerica | exon |
| TCONS_00005584-exon-sc0000054-1510915933:415229..416170 | TCONS_00005584-exon-sc0000054-1510915933:415229..416170 | Clytia hemisphaerica | exon |
| TCONS_00005584-exon-sc0000054-1575043694:415229..416170 | TCONS_00005584-exon-sc0000054-1575043694:415229..416170 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000054 | supercontig | sc0000054:415229..416170 + |
Blast
The following BLAST results are available for this feature:
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