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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005581 ID=TCONS_00005581|Name=TCONS_00005581|organism=Clytia hemisphaerica|type=transcript|length=772bp
ATCGCCCAATTGTTTAAGTACGTCTCGCAGACCACGCGTTCAGTCCGGGC
TTTATGGTTTTGCCTTCCAGCCTTCGTTCAGTCACCATGACAAATACCAT
ATTAACCATTAATTAAAGTAGTTTTACACGTTGGATGTACCATCAACTGC
tttaaagccagattgacattatatgtttttacaaggtctgaatcgctgct
tCAAATACGCTgagtttgcacaaagatagcagctgttcaaccaatcatca
aacttcattttaacataacattttaatgacaagagagttttgacttcaaa
atgttgaacaagaattggaatgaattgtctgcgtttttaatggttctgtg
caatgtttgtgcaatgggacaccaaaacagcaaccattttaaccgaacct
ccacagaatcatcttttttgtactgcCCAAGAAACATGGATCTGTgaatc
atcttttttgtactgtCCAAGAAACATGGATCTGTTTGTATGTTGTTGAA
AAGGATGTGACGATGGAGAGAAAAAGCTGACCAGAAAGCAGTATGTCCCA
TGTTATCTCAAGTAATCCcattttagagcagttgacagtacacAAACTTG
ACATTAACACTCCTTTTGTTGGAGAAATTCCTGAAGGATATTTCATGTTA
TGTTCCTGTTGTTTGGTTTATTTAGAATCATTTTGGTTTTGGAATGCTTC
TGTATCCACTGTattctttacaaaacaatattacattacGATATAGACAA
CAACTTAGCTGAAAATTATATC Run BLAST on NCBI transcript from alignment at sc0000054:394742..395845+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005581 ID=TCONS_00005581|Name=TCONS_00005581|organism=Clytia hemisphaerica|type=transcript|length=1104bp|location=Sequence derived from alignment at sc0000054:394742..395845+ (Clytia hemisphaerica)
ATCGCCCAATTGTTTAAGTACGTCTCGCAGACCACGCGTTCAGTCCGGGG
TAAGTCtcaaaaagtaatgttaaaatCCTCGGACACGCACCAAGAAAATC
CCTGGAGTCCGGGGAATCAGCAGGGTCGTTCGAACATAATTCAACTTTAC
CAGAATCTTTTAGTTTCGTGACTGTTCGATTTGATTGCGGTAATCTAACA
CCTATCGTTTGATAATGTTAGATTAGATTGGtacccgtgaaaaagggtaa
tttgCATCATTTGAGGGAAACTTTACATTGCCTCCAANNNNNNNNNNNNN
NNNNNNNNNNNGATTGACATCACCTGgatatttattacaaattatctatt
gacagtttcttcttctctattcCTATTTCAGCTTTATGGTTTTGCCTTCC
AGCCTTCGTTCAGTCACCATGACAAATACCATATTAACCATTAATTAAAG
TAGTTTTACACGTTGGATGTACCATCAACTGCtttaaagccagattgaca
ttatatgtttttacaaggtctgaatcgctgcttCAAATACGCTgagtttg
cacaaagatagcagctgttcaaccaatcatcaaacttcattttaacataa
cattttaatgacaagagagttttgacttcaaaatgttgaacaagaattgg
aatgaattgtctgcgtttttaatggttctgtgcaatgtttgtgcaatggg
acaccaaaacagcaaccattttaaccgaacctccacagaatcatcttttt
tgtactgcCCAAGAAACATGGATCTGTgaatcatcttttttgtactgtCC
AAGAAACATGGATCTGTTTGTATGTTGTTGAAAAGGATGTGACGATGGAG
AGAAAAAGCTGACCAGAAAGCAGTATGTCCCATGTTATCTCAAGTAATCC
cattttagagcagttgacagtacacAAACTTGACATTAACACTCCTTTTG
TTGGAGAAATTCCTGAAGGATATTTCATGTTATGTTCCTGTTGTTTGGTT
TATTTAGAATCATTTTGGTTTTGGAATGCTTCTGTATCCACTGTattctt
tacaaaacaatattacattacGATATAGACAACAACTTAGCTGAAAATTA
TATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005581-exon-sc0000054-1491911889:394742..394790 | TCONS_00005581-exon-sc0000054-1491911889:394742..394790 | Clytia hemisphaerica | exon |
| TCONS_00005581-exon-sc0000054-1510915933:394742..394790 | TCONS_00005581-exon-sc0000054-1510915933:394742..394790 | Clytia hemisphaerica | exon |
| TCONS_00005581-exon-sc0000054-1575043694:394742..394790 | TCONS_00005581-exon-sc0000054-1575043694:394742..394790 | Clytia hemisphaerica | exon |
| TCONS_00005581-exon-sc0000054-1491911889:395123..395845 | TCONS_00005581-exon-sc0000054-1491911889:395123..395845 | Clytia hemisphaerica | exon |
| TCONS_00005581-exon-sc0000054-1510915933:395123..395845 | TCONS_00005581-exon-sc0000054-1510915933:395123..395845 | Clytia hemisphaerica | exon |
| TCONS_00005581-exon-sc0000054-1575043694:395123..395845 | TCONS_00005581-exon-sc0000054-1575043694:395123..395845 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000054 | supercontig | sc0000054:394742..395845 + |
Blast
The following BLAST results are available for this feature:
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