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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005256 ID=TCONS_00005256|Name=TCONS_00005256|organism=Clytia hemisphaerica|type=transcript|length=1072bp
TGAGGCAATGCATTGGACATCTCAAAAttcactaaaatcaaatttttgct
aTAAAATTGACATTTCTCAACATTgggatctgaaattttcagaaaagacC
CGCTGCAATATTTAAAATGATATGGCtttgtcaaaatgtcaaaatttgca
TTCAGTACagagaaatgataaaaaataacattgttACTAATTTTATCTCA
TGTGTGTAGTAATAAGTTAGTTCATCGCTAATAACTCACTTAAATTGGTT
AGAATGACCTATTTAGGTAGTCCCAATGTCTTCAGGCCAGTGCGTAACAT
AGGTAGAATTCaagatattgataaaaatgtaacattGCATAAATAATCTG
AAATAATGACAATTTCCTTCAAccttttcattgtaacagtgaTTTGCCAA
TGTTTGTAAGTTATTATGATGTATGTTTTGAATTAAAAGAGTTATAGTGA
ATTTGAATTTAGTTCAATTacacaaaaaatgataaaattgtaACAACCCG
TCAGTTTTCTTCCGAAGATTTTTCTATTTCTGCCATATCTAATTTCTTTT
TATCAAACCATTTAGCTTGGTCAATTTTTTAGCTGTTTATGTATCATAGG
AAAAggattcaaaaaaatcataagcaaaggtttcaatttttcactgggAT
CTGTTCTTTCCCTTCGTCCATTCTTTGTGGCTTATCCAACTGAAAAGGAA
TCGTCTCTTTGTCTTTGTCAGCTATGTTTGAATAGTAGGCTATTGTTTGA
ACCGGTAcaaaaacaagccaaaaaaGATGGTGACCAAATCACAGGGTCAG
TGACCAGCTATTTTATGTCTGCCTctgcgttgttactaaaagtgttAATG
aggtggtaacgatgtggtaacgatgtggtaacgaatgttatggtggagtt
gatggttctggtgaatgtgatggtggagttgatggttctggtgaatgtga
tggcaAAGTTGGTTGTAGTGtacatacacttttttctaaaacacccggta
tataaagttttaattttattttattttctcattatatcATCTTTTGGGAC
TACAAAACaagtttttgccaag Run BLAST on NCBI transcript from alignment at sc0000051:585946..587017 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005256 ID=TCONS_00005256|Name=TCONS_00005256|organism=Clytia hemisphaerica|type=transcript|length=1072bp|location=Sequence derived from alignment at sc0000051:585946..587017 (Clytia hemisphaerica)
cttggcaaaaacttGTTTTGTAGTCCCAAAAGATgatataatgagaaaat
aaaataaaattaaaactttatataccgggtgttttagaaaaaagtgtatg
taCACTACAACCAACTTtgccatcacattcaccagaaccatcaactccac
catcacattcaccagaaccatcaactccaccataacattcgttaccacat
cgttaccacatcgttaccacctCATTaacacttttagtaacaacgcagAG
GCAGACATAAAATAGCTGGTCACTGACCCTGTGATTTGGTCACCATCttt
tttggcttgtttttgTACCGGTTCAAACAATAGCCTACTATTCAAACATA
GCTGACAAAGACAAAGAGACGATTCCTTTTCAGTTGGATAAGCCACAAAG
AATGGACGAAGGGAAAGAACAGATcccagtgaaaaattgaaacctttgct
tatgatttttttgaatccTTTTCCTATGATACATAAACAGCTAAAAAATT
GACCAAGCTAAATGGTTTGATAAAAAGAAATTAGATATGGCAGAAATAGA
AAAATCTTCGGAAGAAAACTGACGGGTTGTtacaattttatcattttttg
tgtAATTGAACTAAATTCAAATTCACTATAACTCTTTTAATTCAAAACAT
ACATCATAATAACTTACAAACATTGGCAAAtcactgttacaatgaaaagg
TTGAAGGAAATTGTCATTATTTCAGATTATTTATGCaatgttacattttt
atcaatatcttGAATTCTACCTATGTTACGCACTGGCCTGAAGACATTGG
GACTACCTAAATAGGTCATTCTAACCAATTTAAGTGAGTTATTAGCGATG
AACTAACTTATTACTACACACATGAGATAAAATTAGTaacaatgttattt
tttatcatttctctGTACTGAAtgcaaattttgacattttgacaaaGCCA
TATCATTTTAAATATTGCAGCGGgtcttttctgaaaatttcagatcccAA
TGTTGAGAAATGTCAATTTTAtagcaaaaatttgattttagtgaaTTTTG
AGATGTCCAATGCATTGCCTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005256-exon-sc0000051-1491911889:585946..587017 | TCONS_00005256-exon-sc0000051-1491911889:585946..587017 | Clytia hemisphaerica | exon |
| TCONS_00005256-exon-sc0000051-1510915933:585946..587017 | TCONS_00005256-exon-sc0000051-1510915933:585946..587017 | Clytia hemisphaerica | exon |
| TCONS_00005256-exon-sc0000051-1575043694:585946..587017 | TCONS_00005256-exon-sc0000051-1575043694:585946..587017 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000051 | supercontig | sc0000051:585946..587017 . |
Blast
The following BLAST results are available for this feature:
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