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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004979 ID=TCONS_00004979|Name=TCONS_00004979|organism=Clytia hemisphaerica|type=transcript|length=1145bp
actggctgaaaaaatcctaccgggtctgtgagaagggggtgtataacaTC
GATCTTTGAATTTACGTAATTATCAAAAACTTGTTCATACTTTCTTTTCA
TTGAAGAACATAATATAAAAGGAAGACGAGGAAtggaaaatccaaaaaaa
tgtaTGAAATGCTCGAACCATGGTACAAAGAAATGTGGGCAATGTTTACA
AGTATATTATTGCAGTAGAGATTGTCAGATGGCTCACTGGAAAATCCACA
AACCCTCTTGCAAACCGTGCAATAAACCCAAAGGGGCGTCCACTGAGAAA
CGAAAGGAAAGTAAAAATATGAAGCGTGCCAAAACTATTTATGTTAAGGC
AGGTTCCTTTGACTCTTACGACGAATTTGATGCAAAGACTGAATTATTTG
AATTGGAAAGTTATGGGAACGAGGCTGGAGAGATGAAGGAGATTCGTTCA
CGATTCGGTTGGAAGGATGTATCAGGGACTCGCTATAAATTTTATTCACc
aaatgaaattgattttcaatgGTATTATTACATTTATTATGATGATACTA
GAAATAGAGTGAAAAGATTTTCTGATGAAAATGTGTTCGCATCTGGGTGC
TGTTCTTCAAAAATCtatggtgacgtcatcattcttCGTAGTGGACCCAT
GGGTAGCAATTCATACGATGAATCAATTTCTGTTAAAGACTTGTatgatt
gttttgaattttatcagACTCACAACTCAGTGAAAGTTTTCCAGCAACGA
GAGTATAAAAGATGTATGCAATCTTTTGGAGTTACTGGTGGGCAGCAGCC
ATCATGGCAGATGGGTGAATCTTTTAAATATggtgaaaacatttttgttt
caaagataCTTTAACGTTTCTTCTGTAACCAAGAGATACTTACCCAATAG
AAAACATTTCATCTTCAAGTTTTGTTGTGTTTGTGTTGGATttcttgttt
taaatattttgttaatatttcttCCTACCATTTGTAGAATGTCTTTTGAT
ATTTGAATGTACAGTTGgttatttataaaatattggatAGACCACAGAAT
CATTATGTCTTCAAAGTTAAAGTCCAAAAACAGCTGTAATTCGCATTCGC
CGTATCTAGCAGGATCTACTTTTGGTCATTTCCACTGCTTTTCAG Run BLAST on NCBI transcript from alignment at sc0000050:128802..129946+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004979 ID=TCONS_00004979|Name=TCONS_00004979|organism=Clytia hemisphaerica|type=transcript|length=1145bp|location=Sequence derived from alignment at sc0000050:128802..129946+ (Clytia hemisphaerica)
actggctgaaaaaatcctaccgggtctgtgagaagggggtgtataacaTC
GATCTTTGAATTTACGTAATTATCAAAAACTTGTTCATACTTTCTTTTCA
TTGAAGAACATAATATAAAAGGAAGACGAGGAAtggaaaatccaaaaaaa
tgtaTGAAATGCTCGAACCATGGTACAAAGAAATGTGGGCAATGTTTACA
AGTATATTATTGCAGTAGAGATTGTCAGATGGCTCACTGGAAAATCCACA
AACCCTCTTGCAAACCGTGCAATAAACCCAAAGGGGCGTCCACTGAGAAA
CGAAAGGAAAGTAAAAATATGAAGCGTGCCAAAACTATTTATGTTAAGGC
AGGTTCCTTTGACTCTTACGACGAATTTGATGCAAAGACTGAATTATTTG
AATTGGAAAGTTATGGGAACGAGGCTGGAGAGATGAAGGAGATTCGTTCA
CGATTCGGTTGGAAGGATGTATCAGGGACTCGCTATAAATTTTATTCACc
aaatgaaattgattttcaatgGTATTATTACATTTATTATGATGATACTA
GAAATAGAGTGAAAAGATTTTCTGATGAAAATGTGTTCGCATCTGGGTGC
TGTTCTTCAAAAATCtatggtgacgtcatcattcttCGTAGTGGACCCAT
GGGTAGCAATTCATACGATGAATCAATTTCTGTTAAAGACTTGTatgatt
gttttgaattttatcagACTCACAACTCAGTGAAAGTTTTCCAGCAACGA
GAGTATAAAAGATGTATGCAATCTTTTGGAGTTACTGGTGGGCAGCAGCC
ATCATGGCAGATGGGTGAATCTTTTAAATATggtgaaaacatttttgttt
caaagataCTTTAACGTTTCTTCTGTAACCAAGAGATACTTACCCAATAG
AAAACATTTCATCTTCAAGTTTTGTTGTGTTTGTGTTGGATttcttgttt
taaatattttgttaatatttcttCCTACCATTTGTAGAATGTCTTTTGAT
ATTTGAATGTACAGTTGgttatttataaaatattggatAGACCACAGAAT
CATTATGTCTTCAAAGTTAAAGTCCAAAAACAGCTGTAATTCGCATTCGC
CGTATCTAGCAGGATCTACTTTTGGTCATTTCCACTGCTTTTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004979-exon-sc0000050-1491911889:128802..129946 | TCONS_00004979-exon-sc0000050-1491911889:128802..129946 | Clytia hemisphaerica | exon |
| TCONS_00004979-exon-sc0000050-1510915933:128802..129946 | TCONS_00004979-exon-sc0000050-1510915933:128802..129946 | Clytia hemisphaerica | exon |
| TCONS_00004979-exon-sc0000050-1575043694:128802..129946 | TCONS_00004979-exon-sc0000050-1575043694:128802..129946 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000050 | supercontig | sc0000050:128802..129946 + |
Blast
The following BLAST results are available for this feature:
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