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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00072807-protein ID=TCONS_00072807-protein|Name=TCONS_00072807-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1130bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00072807-protein vs. Swiss-Prot (Human)
Match: TRPA1 (Transient receptor potential cation channel subfamily A member 1 OS=Homo sapiens GN=TRPA1 PE=1 SV=3) HSP 1 Score: 322.398 bits (825), Expect = 5.469e-93 Identity = 281/1059 (26.53%), Postives = 486/1059 (45.89%), Query Frame = 0
Query: 70 VEDLRRILSA-YSGNSHKISSLNKER---------LSALHYAVRYGHIQCVLDIIQADES--SVHRKGKHDVQPIHYAARFYRKTDDADENVIE---ILLKHGADIDAKDSFHYTPLQYAAVSGNVDALRILLNHFKENIEHADPSGVTALHSTCLKGEVECALLLIQNGAKVFQTDNKKMNAIHYAAKSDSRQILDPLIQLLEHDNNALINGESLSVLLNIANINGETPLHLAILEENLEACKILIAKGADVNLAKLRGLTPLHLACVKDSVEIVKLLVREGAR----VTGTDEIREIPLHKAARNDKVEIVKFLLETDPSQVNIEDLDKQTPLIESAAKNNFAITELLLSHGAGIEACDKFMKTSLFWAAE-----KNSLEVFKVLLQHIKDNELDLKELIEQRDTYEHTPLHIAAKGGHTEIVQILVEHGATVSTLNDQERTPLHTAADNGFIDVARVLIK--AKPSMIDEQNASGYTAVHLAAKSGKNEMLSFLLENNADNNPQDNHMLTPLALASYEGHKDCVKTLLHYRAAVEAR-DPNNKTSLFFAAAEGHAEVVKCLLDHGANVTHKDRTGQNLLDVAIKEGKVDVANVLLDRPEWKCVLRNKSFDESGALTSPMGKMIQSMPAMAKKVLDRCMISHENARQVAAERTRSVEITYEFIDDNFADEMLPADKPEHTYFDSVARIANEVLLRSSYSRRRAEEKMRERHNPPLSILCKKEDSDLLNHPVVSTLIEMKWKKFGKPVYYSKFAIFIIFLFFLSGYVLAVTPL--LPSRIFPKEGSNTT---ENCAPHIEKNFKLEDDVINVLFLIMGRYIVLALSCFQLLLEPIQMINRRFSYFCDLTNWLELTMYILALLYTFPNMDEAYLTNCDTVP--YKTSLGACAIFLAWCDLLLFIRKFTNVGIYVVMFIDVMKTFLKFSLTFSLFIVAFAMVFHSLIGPHKELFHTIGRSFAKTVAMTIGEFGYEELF---YAKETSRLPMITWFLFVLFCIVMTILLMNMLVGLAVDDIQSVLKKAELTRVKMQVELVLDVEKMLPMKFRKKWGQFTT 1091
ED + L + G+++ + + NK++ LHYA G I+ +++ I D S +H + P+H A ++N IE LL GA+ + ++ PL A N + +++LL H ++ +G TA+ C E +L++ GAK +++ IH AA S S++ ++ +++ E +G S + +N N TPLHLA+ +LE K+ + GA ++ + T +H A + + EIVKL++ + V TD E LH+A+ D E+ +L+ + +N D + ++PLI + A ++ I LLLS GA ++ D F + L + KN F + Q +KEL+ D TPLH A + G V L+ ++ + + +++PLH AA G I+ + L++ + +++E + G T +HLAAK+G ++++ LL+ A D++ T L AS G+ +K +L R D + T+L FAA EGHA+ V LL H A++ ++ + L +A+ + +V ++ W L+ S + G P+ +MI+ +P K +LD CM+ T +I+ NF P + ++++ + + L+ + + +LLNHPV + MKW +G F + L Y L + P+ L I P N+T + H E D N + +V S F E Q+ ++ +YF D++N LE +Y +++ P E +P + GA A++ W + LL++++F N GI++VM ++KT L+ ++ F ++AF + F+ L+ ++ F + S +T +M +G+ Y E F Y + P++++ V F I + I+LMN+L+GLAV DI V K A L R+ MQVEL +EK LP+ F +K Q +T
Sbjct: 29 TEDFKESLKVVFEGSAYGLQNFNKQKKLKRCDDMDTFFLHYAAAEGQIE-LMEKITRDSSLEVLHEMDDYGNTPLHCAV---------EKNQIESVKFLLSRGANPNLRNFNMMAPLHIAVQGMNNEVMKVLLEHRTIDVNLEGENGNTAVIIACTTNNSEALQILLKKGAKPCKSNKWGCFPIHQAAFSGSKECMEIILRFGEE------HGYSRQLHINFMNNGKATPLHLAVQNGDLEMIKMCLDNGAQIDPVEKGRCTAIHFAATQGATEIVKLMISSYSGSVDIVNTTDGCHETMLHRASLFDHHELADYLISVG-ADINKIDSEGRSPLILATASASWNIVNLLLSKGAQVDIKDNFGRNFLHLTVQQPYGLKNLRPEFMQMQQ--------IKELVMDEDNDGCTPLHYACRQGGPGSVNNLLGFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGAL-FLSDHNGWTALHHASMGGYTQTMKVILDTNLKCTDRLDEDGNTALHFAAREGHAKAVALLLSHNADIV-LNKQQASFLHLALHNKRKEVVLTIIRSKRWDECLKIFSHNSPGN-KCPITEMIEYLPECMKVLLDFCML----------HSTEDKSCRDYYIEYNFKYLQCPLE----------------------FTKKTPTQDVIYEPLTALNAMVQNNRIELLNHPVCKEYLLMKWLAYG----------FRAHMMNLGSYCLGLIPMTILVVNIKPGMAFNSTGIINETSDHSEI-----LDTTNSYLIKTCMILVFLSSIFGYCKEAGQIFQQKRNYFMDISNVLEWIIYTTGIIFVLPLFVE--------IPAHLQWQCGAIAVYFYWMNFLLYLQRFENCGIFIVMLEVILKTLLRSTVVFIFLLLAFGLSFYILLNL-QDPFSSPLLSIIQTFSMMLGDINYRESFLEPYLRNELAHPVLSFAQLVSFTIFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAMQVELHTSLEKKLPLWFLRKVDQKST 1003 The following BLAST results are available for this feature:
BLAST of TCONS_00072807-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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