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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00072631-protein ID=TCONS_00072631-protein|Name=TCONS_00072631-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1542bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00072631-protein vs. Swiss-Prot (Human)
Match: DSCAM (Down syndrome cell adhesion molecule OS=Homo sapiens GN=DSCAM PE=1 SV=2) HSP 1 Score: 444.891 bits (1143), Expect = 3.434e-129 Identity = 311/1020 (30.49%), Postives = 492/1020 (48.24%), Query Frame = 0
Query: 5 GRYQCLVENRVGLDSKYVNIEIEGKPVITDFESMKEGLVGKPLSLHCNVKGSPKPLVRWMRWGSRVT-SSQSMKVLSNGTLLIGSFSAN-EEGEFECHA--QNSFGRTSKKVYVKSIEPPVISPVKVDPAIAGSRVLFTCTCNRGSSDDLTITWYKDG-----ILANQIDGIEKQIGNRYTSNIFIEKVNAKHHGRYTCIARNRAGEMSRFQDFVVYEKALFKDEPKDTSVLYKHSTSLACLATGFPAPQIIWM--KKSPDDFFEPIQLSNRVQQLNNGTLHITMTTGLDDGEYACKAFFDTKQPVFIPPKMSRTAHIKVKVPARVVHSSPTIARMEKGGDVHLICSIVGTTQLSVKWFMNGALIDNRNSKYQIETNENIGALHQTSMLNSTLVIKNVLTRDNATYECMGRNLYGSNKKFFHIMVEEKPSKPIIIRQLDSTPDSMLLSWTAGYNGNLDISEYIIQIKRQNDESDLILWTDAQ-TYSVAVSSVPYRVLNLHPGTQYMVRVKAKNRIGFSDYSHVFLFSTKEKAPSSPPQNVTMVAIAKDKFLLQWKHPSKTSRNGILTRYQISFTPTSSLVVVETKIVNIPSVTE---YTLTNLYQYTAYKVQLQAATKVGLGPPSTPVYATTLEGVPSQAPTSVEAHALSAHQIVITWKAIPQNAVNGVLKGYTVQY----TDIERSEHYQTTVKGLQASLTNLKAFTRYQIRVSAYTKIGLGVASTEQHIVTYEDRPGKPADFKAIPANPKEIVLTWRPPLEKNGIILNYNIYFKSEHDEYERKSVVQPHLVKYRIQDLVVMRKYTFWMSAVTSKGEGNFTEHRIARTTTHVPARIITPQNFIIHKPIGSDVSLPCTAVGYPKPMITW---SNRHPSGNNPVNTRRWMAEDKPMLLYRITKDAEGEYNCTAMNSYGSDWNVVKLKVQVPPFPPEEISSSLVHKTDDFYTLNITWVLGPNGGSTTIKNHVFYIIENQHFDWIEDSVQGHQGWFGISNVTYDDVIYFKVSSENAIGIGSMT 1002
G Y+C N G+ I + G I +++ + G+ +HC V G P ++W + + + + + + +NGTL + +EGE+ C+ Q TS+ V+V PP I P + G RV C G +TITW KDG L ID I+ +TS++ I ++ H+G YTCIARN A + +V F +P+D +Y + L C A G+P P I+W K + F+PI L+ R+Q L+NG+L I D G Y CK D V S++ ++ VK+PA ++ S P +G + C+ G + V+W +I+ ++Y + T E +G + STL I + D+ + C N YG ++ + V+E P P I + D ++ L WT G++GN I+ Y I+ K ++D W AQ T V+ ++++HP + Y +R+ AKNRIG S+ S+ + E AP PPQ V + I+ + WK P K +NGI+ YQI + S+ + I+++ + + YTL NL ++T Y + +QA + G GP S + TTLE VPS P +V+A A S I I+W + + A+NG+L+G+ V Y D E E T L L+ +T Y I+V A+T+ G GV S + T ED PG PA KA A+ + ++W PPL+ NGII Y ++ + + P YRI +L R+Y+ W+ AVTS G GN +E PARI+T + P D+ LPC AVG P P + W SN PS ++ RR + + ++ + + G Y+C A N++GSD ++ L+VQVPP P S ++ ++W+ G NGGS +I+ ++ E+ W + + + + N+ F ++++N +G G ++
Sbjct: 480 GVYRCTANNSAGVVLYQARINVRGPASIRPMKNIT-AIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLS-TSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLP-ITITWQKDGRPIPGSLGVTIDNID------FTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADV------SKSMYLTVKIPA-MITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMARYLVSTKE-VG-----EEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIK-DVKARTITLRWTMGFDGNSPITGYDIECKNKSDS-----WDSAQRTKDVSPQLNSATIIDIHPSSTYSIRMYAKNRIGKSEPSNELTITADEAAPDGPPQEVHLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISVDTSGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLMDGELGEIKNITTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVWVVAVTSAGRGNSSEIITVEPLAKAPARILTFSG-TVTTPWMKDIVLPCKAVGDPSPAVKWMKDSNGTPSLVT-IDGRRSIFSNGSFIIRTVKAEDSGYYSCIANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSS-----SITLSWLPGDNGGS-SIRGYILQYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRIS 1463 HSP 2 Score: 92.8189 bits (229), Expect = 1.074e-18 Identity = 97/394 (24.62%), Postives = 167/394 (42.39%), Query Frame = 0
Query: 7 YQCLVENRVGLDSK-------YVNIEIEGKPVITDFESMKEGLVGKPLSLHCNVKGSPKPLVRWMRWGSRVTSSQSMKVLSNGTLLIGSFSANEEGEFECHAQNSFG--RTSKKVYVKSIEPPVISPVKVDPAIAGSRVLFTCTCNRGSSDDLTITWYKDGILAN-----QIDGIEKQIGNRYTSNIFIEKVNAKHHGRYTCIARNRAGEMSRFQDFVVYEKALFKDEPKDTSVLYK------HSTSLACLATGFPAPQIIWMKKSPDDFFEPIQL--SNRVQQLNNGT------LHITMTTGLDDGEYACKAFFDTKQPVFIPPKMSRTAHIKVKVPA--RVVHSSPTIARMEKGGDVHLICSIVGTTQLSVKWFMNGALIDNRNSKYQIETN 370
Y+C+ +R +++ +V+ P I D ++ + G+ + L C G P+P RW++ + S + G LLI + ++ G + C N +G + ++YVK ISP KV ++ GS+V +C+ ++D ++WY++G + N +I GI + N+ ++ + G Y C R + QD+V + L PK S + SL C G P P I W + DD +PI S+R+ Q+ L+I+ + D G Y C A ++ A I V+ PA R + + IA G D ++ C ++G S+KW+ N L+ + + E N
Sbjct: 195 YRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTG-LLIENIRPSDSGSYVCEVSNRYGTAKVIGRLYVKQPLKATISPRKVKSSV-GSQVSLSCSVT--GTEDQELSWYRNGEILNPGKNVRITGINHE-------NLIMDHMVKSDGGAYQCFVRK---DKLSAQDYV--QVVLEDGTPKIISAFSEKVVSPAEPVSLMCNVKGTPLPTITW---TLDD--DPILKGGSHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLY-------QARINVRGPASIRPMKNITAIA----GRDTYIHCRVIGYPYYSIKWYKNSNLLPFNHRQVAFENN 556 The following BLAST results are available for this feature:
BLAST of TCONS_00072631-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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