TCONS_00072191-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072191-protein
Unique NameTCONS_00072191-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length261

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072191-protein ID=TCONS_00072191-protein|Name=TCONS_00072191-protein|organism=Clytia hemisphaerica|type=polypeptide|length=261bp
FFFYQFQGIRGEEGQPGFQGQRGNRGQPGPPGPRGAPPIESLIPSSSWRD
YYKENPNQFYRAVAGDYLSYLREEVDDLQYPRGTRDNSALNCQELLDNRN
DIQNGHYWIDPNRGCAWDAFETKCLFKGDAGYTCIKPQPKTVHLRKFGIT
RHQEMVLSKFVKVKASVRRPQLNFVRLLASDGYQDVTLRCFRPLYNIKNF
SFVGHNKIEINGRDRTQVKIIANSCRRANKRRLGRITFRIFTDGNLNLFP
IKDVRIRYEAI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044823XLOC_044823Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072191TCONS_00072191Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000885Fib_collagen_C
Vocabulary: Molecular Function
TermDefinition
GO:0005201extracellular matrix structural constituent
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005201 extracellular matrix structural constituent
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000885Fibrillar collagen, C-terminalSMARTSM00038COLFI_2coord: 61..254
e-value: 2.2E-10
score: -4.5
IPR000885Fibrillar collagen, C-terminalPFAMPF01410COLFIcoord: 68..255
e-value: 5.7E-28
score: 97.7
IPR000885Fibrillar collagen, C-terminalPROSITEPS51461NC1_FIBcoord: 61..261
score: 26.655
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..40

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072191-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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