TCONS_00072185-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00072185-protein
Unique Name	TCONS_00072185-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2152

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00072185-protein ID=TCONS_00072185-protein|Name=TCONS_00072185-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2152bp
MEDDVVFICPVCLRKYPKDEIYCSKDANKLLPWEGKVKSALPGDEQRLEN
MDIDVSSMRADPDVQTSTNKKHDVKMNTSFGKGQSIDTGNAHHPFTFQQR
ASTNEPHKPNSPMESGRMELDEQPKNGKVSTNVVIKIESDSDSAMENHDN
SVIIIEDEKNLDNERQRTLQEIAKAAPKSIKDSKQDPCENFQNPNPQRKA
QTLSASLVQLKESSLSDKQDSSTKSESELPSDIEVIEVYDEKPMTMMQEH
QNQLTRTVKEEANTMDVKLDTSEAETHKTATSENFKPGYTNPTKSSKAKE
ASNKTHEQQPKTNQQDNQKIIGHQHQYKTQNNQRNQKFDVKFVKYTSTEL
CEVDFYVAIPSGMKTRVFVTGGFHREGQWNAMLTEMKAFEKIESLGLDLL
FGKVSIPCYLLKRKIPYKYCLLPEDSQEIIHEDIETNFPESYRNRLFEVS
IEEVQDGHLAQFDDVILLGDSLTFFERGKNWIKGMVGMSSNKKHFRKRQD
YNCKLFLYHFNRIFRLKDHETKMKLLNHLSRCFLNSKTELRNTHLSWEKI
DANNKQLEVFTTSIGKVLEKNVQALVPTSSNIDQIDALMESMSFVVFISN
MLENHKKFIKTDLILVLMESLSMEHLSMESHELFLQRLKEVYHRKPLRFI
LDKLVIIWKTFMSYPKVSTSVKWLYPLVLMHELDKLLDAGMNNNDLKDTD
ELTLRYCGLFNLGENCLPSSLNNSRNLDGFFEGIKHVAGSLKKDTILQRA
LVYMMQPKHLIIGFQFGFKKRMVLRKALSFVKWNSFAKENEVCTALKALD
KQIQDVERKDLCLLVVLLLDFLATVLGREFLQLTTTVLDTTLNALKTVQE
FIDELEPDLLHSFQNRTAAKEPTLMKVLHDFTSYFGLRHKTCNDVESFLH
ILFHLERVTLFSSEFVVKWRKKLHKRTAEFLDDLCRYKEKIFLEIYLEAK
LDGFILQNFDEAFEKNIDKFLTAGVLESTLAHRRTSIFLGKKIKDLWEKH
NTDKDRFEWMMGWNPFKVVFKHYWNGNDKTLEGIMETCSNIILNHCHELN
DQNVTIKNLKSIKQYRERFFQILDIVVESVDSVSEIKANFEQRSKEMEAY
KEAFNVISYLNEFLLKLSEQIGDLRIFRNKMQTNADSLKLIDIYKKGTDS
ISYFDVDPRAQPLLKLFLKSDMASSVIFQQLWKSTLNAAASKERILGFES
QFTDVNEKALFQMSFKVLLSGITIPDNFSLPFNLQQIILYLLLPTLNQTY
DLLVDLCGGSISIGEALKYYEQFQSATSFAKELTQLKTFFEADFTERSIK
KCHQRIKCADTMKDCVEQSNAILETASVLGLCGNFKSVELIKAKATANED
TLLNAITDDLIKDTKKVINTSDEMKQIFKAVAHNLNILQWLKRHLKDAKE
VKVFVEMMSIAAGESDYEVDRVAYFEASCQAFSAIIFDLDQNSGYEEFEE
ACKRAAEAVKNDPTIIEKLNDSNKNLEWFKQAKESQGSVSARSFLEAKKA
NSNGKYIIGNLNGKAEFFFEQTAALHHVVKLKIVYEDDQVQSKELSLDDV
HDLQSRLMLLGRDNNKTEENIKEGIAEKEYFVKQAEIITRLADAYVRLIE
AGDIQYLNWKKEYQCNVEEAKQRTFEEYFREIEIEIEKFERRLESWNAEL
MQFRMENPYANHFSVKQMLVLRKYLKQYSSGSAVPEINNQVFTLLRSISE
EVTVKKVKECCLFMHSSASKSPIKNDKKKLEDNETNFTRFTYKELDALIQ
KFLNENDDIEKDVVLASLMQVPDFRIEKKVILWCGKHEDDEDLIEELSEK
AEAELEKMKETIYLSSDGEDCEMEIIDHLEKDYLPLDLFGNFLNQFGTIT
HHRSIPTYLQKHQPNLIILPRDEILASVIAMYDNDGSASLPSSSEVLLCS
DDVSLEQVEMLIIRAALTEDGMFCLAFAEHLNYENSEKVFGFLQKIMKEK
NMGYLVVICSSEEENQSYLASALDSYQRQCVHRKRDISSILSKAFCLKEE
IEHNKKVMYGPTVDEDSYNVRVISSTRGGMGKSLMIDRKCHQLDYYTANS
ATTIQKERFQRYQTLVRTPVHGTAVCYEDVVSKLAENSIFDADFPRIYHF
DVAPTVQEGLDILFFNVFVLGSMQTKTGKVWRKNNNDMCYVEMTKISKKV
KE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044821	XLOC_044821	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00072185	TCONS_00072185	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1787..1811
None	No IPR available	COILS	Coil	Coil	coord: 1742..1762
None	No IPR available	COILS	Coil	Coil	coord: 1629..1656
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..199

Blast

[Close]

BLAST of TCONS_00072185-protein vs. Swiss-Prot (Human)
Match: RN213 (E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens GN=RNF213 PE=1 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 3.136e-34
Identity = 134/513 (26.12%), Postives = 232/513 (45.22%), Query Frame = 0

Query: 1232 FNLQQIILYLLLPTLNQTYDLLVDLCGGSISIGEALKYYEQFQSATSFAKELTQLKTFFEADFTERS--IKKCHQRIKCADTMKDCVEQSNAILETASVLGLCGNFKSVELIKAKATANEDTL----LNAITDDLIKDTKKVINTSDEMKQIFKAVAHNLNILQWLKRHLKDAKEVKVFVEMMSIAAGESDYEVDRVAYFEASCQAFSAIIFDLDQNSGYEEFEEACKRAAEAVKNDPTIIEKLNDSNKNLEWFKQAKESQGSVSARSFLEAKKANSNGKYIIGNLNGKAEFFFEQTAALHHVVKLKIVYEDDQVQSKELSLDDVHDLQSRLMLLG--RDNNKTEENIKEGIAEKEYFVKQAEIITRLADAYVRLIEAGDIQYLNWKKEYQCN---------------VEEAKQRT-FEEYFREIEIEIEKFERRLESWNAELMQFRMENPYANHFSVKQMLVLRKYLKQYSSGSAVPEINNQVFTLLRSISEEVTVKKVKECCLFMHSSASK 1720
              L+++  YL  P+  +   L  DL  G +++ E    ++ F     +    ++LK     D  ++   IK   ++IK    +   V  +  IL+    LGL G+F  +  +    T N D      L+ I  +LI+  K + + S+   +  +A++     + W++  L    E+KVFV++ SI+AGE+D +VDRVA F  + Q +++++F LD +  +  F +  K+  +A+  D  +  KL DS +NLEW K   ES GSV   S   A   N  G Y+I    G  +        LH ++           +S+E SL++V +L ++LML+   +D N T         E E F +    + RL+ A++ L  AG++ +  W     C+               V E K+     E    +  ++E F   L+SW   + Q RME+ Y N ++ +Q++ L   L++     A         T+L  I    T++ V    +   S A++
Sbjct: 1269 LELEEVYDYLYQPSYRKFIKLHQDLKSGEVTLAEIDVIFKDF--VNKYTDLDSELKIMCTVDHQDQRDWIKDRVEQIKEYHHLHQAVHAAKVILQVKESLGLNGDFSVLNTL-LNFTDNFDDFRRETLDQINQELIQAKKLLQDISEARCKGLQALSLRKEFICWVREALGGINELKVFVDLASISAGENDIDVDRVACFHDAVQGYASLLFKLDPSVDFSAFMKHLKKLWKALDKDQYLPRKLCDSARNLEWLKTVNESHGSVERSSLTLATAINQRGIYVIQAPKGGQK--ISPDTVLHLILPES---PGSHEESREYSLEEVKELLNKLMLMSGKKDRNNT---------EVERFSEVFCSVQRLSQAFIDLHSAGNMLFRTWIAMAYCSPKQGVSLQMDFGLDLVTELKEGGDVTELLAALCRQMEHF---LDSWKRFVTQKRMEHFYLNFYTAEQLVYLSTELRKQPPSDA-------ALTMLSFIKSNCTLRDVLRASVGCGSEAAR 1754

The following BLAST results are available for this feature:

BLAST of TCONS_00072185-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00072185-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RN213	3.136e-34	26.12	E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens...	[more]

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TCONS_00072185-protein (polypeptide) - C. hemisphaerica