TCONS_00072091-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072091-protein
Unique NameTCONS_00072091-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length644

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072091-protein ID=TCONS_00072091-protein|Name=TCONS_00072091-protein|organism=Clytia hemisphaerica|type=polypeptide|length=644bp
DLFDQNKPISEYSEELQKSLVEISNTEEKVFENVLNNINFFLWMRESMKG
PQEVKTFVDLVTNSAGESDYEHDRILDFESVCQAFRPIIFNVRREASFGD
LHIACNETSIHTNTDIFYKLSDCKRNLEWFKHMKRIQGSASTKTFEQIKA
INKKGEYTIGIAQPDYEMFLTEDIDMKKVVRLQFTSKKTGTRDLLLTEIE
DLQSSLMLLGREARGGAENHDEAETEKTIFVQHTELAIQLGTLYVDLCQM
GDVASFNWNISFPCNIYSTTEGDPEKKSRQLYEIYAEIKKMEERRNKLNS
LLEVHTNYPALNYFTNKQCLLLQKYFYQRDGNLLLNVIGLLRLTPGRKNM
TMKTARQFIDFILKNSATIDDEKSIVDVGTAPFQSLSFVGRVLNVNKVNN
AYSIPSYINCNKPTLVSLPKDEVLQFVLGMYFEYNGELPNQENILVCTKE
TTLEQVKLLMLRVGYNKDGLYCLVFADSMNYIACEKAVDFMNQIMRNGRE
MGKFVFVCCTENESKSNLVASLDTYRTRKSLEYTETEQRLRDKLCMRTIY
KTHSGLNFASKADVEDFNTRIITSSEGGMGKSLYVDERKEIMLSSCYGFT
SSEKASKNILTIRVQGTTVDVVEIVERLQEINSQQMDDHPKFYH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044777XLOC_044777Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072091TCONS_00072091Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 9..29

Blast
[Close]
BLAST of TCONS_00072091-protein vs. Swiss-Prot (Human)
Match: RN213 (E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens GN=RNF213 PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 2.416e-16
Identity = 66/247 (26.72%), Postives = 114/247 (46.15%), Query Frame = 0 
Query:   15 ELQKSLVEISNTEEKVFENVLNNINFFLWMRESMKGPQEVKTFVDLVTNSAGESDYEHDRILDFESVCQAFRPIIFNVRREASFGDL--HIACNETSIHTNTDIFYKLSDCKRNLEWFKHMKRIQGSASTKTFEQIKAINKKGEYTIGIAQPDYEMFLTEDIDMKKVVRLQFTSKKTGTRDLLLTEIEDLQSSLMLL-GREARGGAENHDEAETEKTIFVQHTELAIQLGTLYVDLCQMGDVASFNW 258
            + +K L +IS    K  + +     F  W+RE++ G  E+K FVDL + SAGE+D + DR+  F    Q +  ++F +     F     H+     ++  +  +  KL D  RNLEW K +    GS    +     AIN++G Y   I  P     ++ D  +  ++     S +  +R+  L E+++L + LML+ G++ R    N+ E E    +F        +L   ++DL   G++    W
Sbjct: 1402 QAKKLLQDISEARCKGLQALSLRKEFICWVREALGGINELKVFVDLASISAGENDIDVDRVACFHDAVQGYASLLFKLDPSVDFSAFMKHLKKLWKALDKDQYLPRKLCDSARNLEWLKTVNESHGSVERSSLTLATAINQRGIYV--IQAPKGGQKISPDTVLHLILPESPGSHEE-SREYSLEEVKELLNKLMLMSGKKDR----NNTEVERFSEVFCS----VQRLSQAFIDLHSAGNMLFRTW 1637
The following BLAST results are available for this feature:
BLAST of TCONS_00072091-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RN2132.416e-1626.72E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens... [more]
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