TCONS_00071992-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071992-protein
Unique NameTCONS_00071992-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length230

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071992-protein ID=TCONS_00071992-protein|Name=TCONS_00071992-protein|organism=Clytia hemisphaerica|type=polypeptide|length=230bp
QGMKLKSIVHIQKNVDSRFYQYTEWWQNHYFVEIDIEIPLDEQENKAFPL
VGNKNNVLRLAQYVHVTPSNDACFMADWEWRENVEVEILTPIRNQIQWLE
YLLVMLENVVKKTHENKITLNVIDYKSDDGYVLSLLNKFDVKYKYILADD
VTFNKVKALNIGLSHIGNNNSIVFVMDLHLQLPLNIFDRIRKFTIQDKTT
FCPTLLKFQCGEHEQYTTLHETLWIDAGMA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044695XLOC_044695Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071992TCONS_00071992Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR008428Chond_GalNAc
Vocabulary: Molecular Function
TermDefinition
GO:0008376acetylgalactosaminyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0032580Golgi cisterna membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0032580 Golgi cisterna membrane
molecular_function GO:0008376 acetylgalactosaminyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 81..223
e-value: 1.4E-4
score: 21.0
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 77..206
IPR008428Chondroitin N-acetylgalactosaminyltransferasePFAMPF05679CHGNcoord: 80..204
e-value: 1.6E-10
score: 40.3

Blast
[Close]
BLAST of TCONS_00071992-protein vs. Swiss-Prot (Human)
Match: B4GN4 (N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 OS=Homo sapiens GN=B4GALNT4 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.232e-18
Identity = 39/133 (29.32%), Postives = 75/133 (56.39%), Query Frame = 0 
Query:   80 WRENVEVEILTPIRNQIQWLEYLLVMLENVVKKTHENKITLNVIDYKSDDGYVLSLLNKFDV-KYKYILADDVTFNKVKALNIGLSHIGNNNSIVFVMDLHLQLPLNIFDRIRKFTIQDKTTFCPTLLKFQCG 211
            WR++V V  + P++NQ +W+   L  +  +  +T +++ ++ ++D++S+D  V   L    + +Y+Y L     F +   L  G+  + + +SIVF+ DLH+  P NI D IRK  ++ +  F P +++  CG
Sbjct:  818 WRQDVMVHFIVPVKNQARWVAQFLADMAALHARTGDSRFSVVLVDFESEDMDVERALRAARLPRYQY-LRRTGNFERSAGLQAGVDAVEDASSIVFLCDLHIHFPPNILDGIRKHCVEGRLAFAPVVMRLSCG 949
The following BLAST results are available for this feature:
BLAST of TCONS_00071992-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B4GN42.232e-1829.32N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-a... [more]
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