TCONS_00071974-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071974-protein
Unique NameTCONS_00071974-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length723

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071974-protein ID=TCONS_00071974-protein|Name=TCONS_00071974-protein|organism=Clytia hemisphaerica|type=polypeptide|length=723bp
MNSISSKYIHEIKVLGLEKLRKDFSGKRYEFVLNVKWSNGTDAKIYRPHS
MFFDFQGVLAEMFKDVKIPSAPVVRFHWALLGKLGHEKECKVMEEFCQKI
IRLPPNVSKASIVLHFFETWGTDVRSKEKKQSEFFDTEVGRASIQSTQER
KAGMSDKDDQYRVLASYEATNIGETSLIEGTFVTIVEKNERGWWFVAHDN
GGQGWAPATYLEPIIPSGNNDEGYDWISVTDSNGVGEKYVSMVGYTAQNS
DELSYGAGQEIEALMKSSYGWWKVRINGQVGITPATNLQKVDDTTLYQSA
DELKSRTVSISSSSGLYAVIRKPPPRRESLRSRSSSGQSNLQSPPLDSTA
ITNNNGSLTGKKPSRFVYSATSFAGGKFVIGDEDKENGGTLPHIDIAKTP
TEEDQQISHAVENYENVDANTLTNNKLIRPVKSIRSQSVAPETIPIDKKV
IALSNYMNYRRSLDGSDAHFFVALMDYDPGQHRKDDIRLTKGDLVQLISS
DSGWLFVLLLKDDFDKQGWVPDTYLERKLDIDVGSIAAHTERGGSPKPKP
RPRPAPRPRTKPQETPQTNLPKRPAPPKPDERDALPPSPPPVPAQQPYEE
DLYDEPEMTLRSVYDAEPWYFGNISRADCERQLSTYGRQQEFLIRDSQRA
KGSYALSVKYCYRIRHFPIEAVDGGKLLIGKLSFNNLMDIVIYYQKNPLF
YSEHKEPISLGSAFVKDRTGQKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044689XLOC_044689Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071974TCONS_00071974Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000980SH2
IPR001452SH3_domain
IPR001683Phox
IPR011511SH3_2
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0035091phosphatidylinositol binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0035091 phosphatidylinositol binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000980SH2 domainPRINTSPR00401SH2DOMAINcoord: 639..649
score: 40.35
coord: 683..697
score: 31.52
coord: 651..662
score: 40.69
coord: 663..673
score: 24.86
coord: 619..633
score: 49.34
IPR000980SH2 domainSMARTSM00252SH2_5coord: 617..700
e-value: 1.6E-23
score: 94.2
IPR000980SH2 domainGENE3D3.30.505.10coord: 624..715
e-value: 5.9E-23
score: 80.2
IPR000980SH2 domainPFAMPF00017SH2coord: 619..694
e-value: 6.4E-16
score: 58.1
IPR000980SH2 domainPROSITEPS50001SH2coord: 619..708
score: 18.65
IPR000980SH2 domainSUPERFAMILY55550SH2 domaincoord: 616..700
IPR001452SH3 domainSMARTSM00326SH3_2coord: 469..529
e-value: 2.7E-8
score: 43.6
coord: 159..215
e-value: 5.1E-10
score: 49.3
coord: 237..292
e-value: 1.1E-7
score: 41.5
IPR001452SH3 domainPFAMPF00018SH3_1coord: 245..285
e-value: 6.7E-7
score: 28.7
coord: 472..521
e-value: 2.1E-6
score: 27.1
IPR001452SH3 domainPROSITEPS50002SH3coord: 156..216
score: 12.172
IPR001452SH3 domainPROSITEPS50002SH3coord: 466..530
score: 12.926
IPR001452SH3 domainPROSITEPS50002SH3coord: 234..293
score: 12.041
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 469..556
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 160..214
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 234..315
NoneNo IPR availableGENE3D2.30.30.40coord: 149..208
e-value: 1.9E-14
score: 52.6
NoneNo IPR availableGENE3D2.30.30.40coord: 471..623
e-value: 1.3E-13
score: 49.9
NoneNo IPR availableGENE3D2.30.30.40coord: 209..262
e-value: 3.4E-10
score: 39.1
NoneNo IPR availableGENE3D2.30.30.40coord: 263..470
e-value: 2.1E-9
score: 36.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 536..598
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..358
NoneNo IPR availableCDDcd11856SH3_p47phox_likecoord: 160..213
e-value: 5.56791E-16
score: 72.2839
IPR001683Phox homologous domainPFAMPF00787PXcoord: 20..118
e-value: 4.3E-6
score: 26.6
IPR001683Phox homologous domainGENE3D3.30.1520.10coord: 2..137
e-value: 6.7E-10
score: 38.4
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 1..124
score: 8.546
IPR001683Phox homologous domainSUPERFAMILY64268PX domaincoord: 8..132
IPR011511Variant SH3 domainPFAMPF07653SH3_2coord: 161..214
e-value: 2.9E-7
score: 30.0

Blast
[Close]
BLAST of TCONS_00071974-protein vs. Swiss-Prot (Human)
Match: SPD2B (SH3 and PX domain-containing protein 2B OS=Homo sapiens GN=SH3PXD2B PE=1 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 4.850e-36
Identity = 99/293 (33.79%), Postives = 147/293 (50.17%), Query Frame = 0 
Query:    7 KYIHEIKVLGLEKLRKDFSGKRYEFVLNVKWSNGTDAKIYRPHSMFFDFQGVLAEMFKDVKIPSAPVVRFHWALLGKL----GHEKECKV-----MEEFCQKIIRLPPNVSKASIVLHFFETWGTDVRSKEKKQSEFFDTEVGRASIQSTQERKAGMSDKDDQYRVLASYEATNIGETSLIEGTFVTIVEKNERGWWFVAHDNGGQGWAPATYLEPIIPSGNNDEGYDWISVTDSNGVGEKYVSMVGYTAQNSDELSYGAGQEIEALMKSSYGWWKVRINGQVGITPATNLQK 290
            + I E+KVL ++K R     K Y +++ V WS+G+   IYR +S FFD Q  + + F        P  R    L GK+     H ++  V     ++E+C+ +I+LPP +S+   VL FFET   D+   +++        +G+      Q     M    +QY V+A+Y+     E SL  G  V I+EKNE GWWFV+     QGW PAT LE        D   D  S+       EKY  +  YTA++ DE++   G  +E + K+  GWWK+R  G+ G  PA+ L+K
Sbjct:    5 RSIVEVKVLDVQKRR--VPNKHYVYIIRVTWSSGSTEAIYRRYSKFFDLQMQMLDKFPMEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALIQLPPYISQCDEVLQFFETRPEDLNPPKEEH-------IGKKKSGGDQTSVDPMVL--EQYVVVANYQKQESSEISLSVGQVVDIIEKNESGWWFVSTAEE-QGWVPATCLE------GQDGVQDEFSLQPEEE--EKYTVIYPYTARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLKK 277
The following BLAST results are available for this feature:
BLAST of TCONS_00071974-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPD2B4.850e-3633.79SH3 and PX domain-containing protein 2B OS=Homo sa... [more]
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