TCONS_00071959-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071959-protein
Unique NameTCONS_00071959-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length306

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071959-protein ID=TCONS_00071959-protein|Name=TCONS_00071959-protein|organism=Clytia hemisphaerica|type=polypeptide|length=306bp
ISQETLTKMNFEPKRLPYKGQAKSFNAPIPFEECCYVKIRAGNSEINARF
IINPHPSVTILGYDSSIELNLLRVGPDPVATTTTTERVNNITANSSKMND
IITEYSDRFQGLGKLKGVSLNIKTDPSIQPVAQKPRRLPILMRKEVDTEL
DRLLELGVIEPVSDPPSWVNPIVPVPKPNSSNIRLCVDMRAANTAIIREP
YQIPTLDELLHEFNGCKLFTKLDLNEGYHQIELDKASRELTAFATYRGIF
RYTRLLFGMSSAAEIYQREIELALTGLPGVKNISDDIIIGGRTEEELISR
TEAVFE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044675XLOC_044675Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071959TCONS_00071959Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 175..296
e-value: 6.2E-7
score: 29.1
NoneNo IPR availableGENE3D3.10.10.10coord: 121..254
e-value: 4.8E-38
score: 129.6
NoneNo IPR availableGENE3D3.30.70.270coord: 255..306
e-value: 3.9E-5
score: 23.1
NoneNo IPR availableCDDcd01647RT_LTRcoord: 157..306
e-value: 5.82238E-50
score: 164.691
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 102..306

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071959-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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