TCONS_00071837-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071837-protein
Unique NameTCONS_00071837-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length294

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071837-protein ID=TCONS_00071837-protein|Name=TCONS_00071837-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MMLVMLFVALFPIAICAPTSSDFNQLKTEIKSLRDEIFYLKSKDQYQNGI
CDVNADKCGTCYCREDYNMIEKFYCDCRAKPVRRDCKDHYQKGGRVSGLY
RINQNILGALVQVYCDQTTDGGGWTLIQRRVDGSTNFYRNWTEYKEGFGQ
LHREHWLGNELIYRLVAQAFLKGSEARFDMQAKGASKRIWAKYSTFGINQ
ETDGYRLHVAGYSGTAGDKMSNHNGLKYTTYDRDSDTWSAGNCAKDRNGA
WWYSQCTDSNLNSYYDPFDKSSASKSLGWDPMSIKFSEIKLRRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044604XLOC_044604Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071837TCONS_00071837Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 81..294
e-value: 2.5E-69
score: 246.3
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 83..290
e-value: 2.4E-56
score: 190.9
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 77..294
score: 47.948
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 84..294
e-value: 2.19231E-84
score: 254.087
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 77..293
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 227..291
e-value: 1.4E-20
score: 72.7
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 17..226
e-value: 3.9E-58
score: 196.1

Blast
[Close]
BLAST of TCONS_00071837-protein vs. Swiss-Prot (Human)
Match: FBCD1 (Fibrinogen C domain-containing protein 1 OS=Homo sapiens GN=FIBCD1 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 4.476e-49
Identity = 99/228 (43.42%), Postives = 130/228 (57.02%), Query Frame = 0 
Query:   75 CDCRAKPVRRDCKDHYQKGGRVSGLYRINQNILGALVQVYCDQTTDGGGWTLIQRRVDGSTNFYRNWTEYKEGFGQLHREHWLGNELIYRLVAQAFLKGSEARFDMQAKGASKRIWAKYSTFG-----INQETDGYRLHVAGYSGTAGDKMSNHNGLKYTTYDRDSDTWSAGNCAKDRNGAWWYSQCTDSNLNSYYDPFDKSSASKSLGWDP-----MSIKFSEIKLR 292
            C   ++P  RDC D    G +  G+Y +      A  QVYCD  TDGGGWT+ QRR DGS NF+R W  Y++GFG+L  EHWLG + I+ L  QA     E   D++    +   +A+Y +FG     ++ E DGY L VA YSGTAGD +  H+G+++TT DRDSD  S  NCA    GAWWY  C  SNLN  Y     +S +  + W        S+KFSE+K+R
Sbjct:  235 CATGSRP--RDCLDVLLSGQQDDGVYSVFPTHYPAGFQVYCDMRTDGGGWTVFQRREDGSVNFFRGWDAYRDGFGRLTGEHWLGLKRIHALTTQA---AYELHVDLE-DFENGTAYARYGSFGVGLFSVDPEEDGYPLTVADYSGTAGDSLLKHSGMRFTTKDRDSDH-SENNCAAFYRGAWWYRNCHTSNLNGQYLRGAHASYADGVEWSSWTGWQYSLKFSEMKIR 455
The following BLAST results are available for this feature:
BLAST of TCONS_00071837-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBCD14.476e-4943.42Fibrinogen C domain-containing protein 1 OS=Homo s... [more]
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