TCONS_00071642-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071642-protein
Unique NameTCONS_00071642-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length308

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071642-protein ID=TCONS_00071642-protein|Name=TCONS_00071642-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
VGSDEKQRIRSALDDIMEAARCLTFQEFNVGASNVPTAHVRVIKSSGCWS
LVGRTGRQQDLSLGNGCVYTGTIIHEFLHAIGFYHEQSRPDRDSYIRINW
GDIQSGREHNFNIQKNINSLGIKYDPKSVMHYSNGAFAKSRGLKTIEWKA
DPSMSLGGRVLTASDKQQINLKYCKGPVTTTTTRTTKTRPTRPTTRSTRP
TTRPTRPTKSTVRPTAPPTEVCGDKSGFCISARRYQGRCGTRLSFLCPRS
CRKCTGPEDEKCLNLKDQRNNCLRKSQKGECRIRNYRRKWRMKNDCPRTC
CERGELYK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044516XLOC_044516Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071642TCONS_00071642Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR006026Peptidase_Metallo
IPR024079MetalloPept_cat_dom
IPR003582ShKT_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001506Peptidase M12APRINTSPR00480ASTACINcoord: 67..85
score: 51.75
coord: 86..103
score: 50.46
coord: 123..138
score: 45.94
coord: 161..174
score: 31.79
IPR001506Peptidase M12APFAMPF01400Astacincoord: 3..175
e-value: 1.8E-47
score: 161.3
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 1..128
e-value: 6.1E-24
score: 95.5
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 1..174
e-value: 7.6E-42
score: 143.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..217
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 3..174
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 262..308
score: 7.641
IPR034035Astacin-like metallopeptidase domainCDDcd04280ZnMc_astacin_likecoord: 2..173
e-value: 4.8628E-69
score: 213.972

Blast
[Close]
BLAST of TCONS_00071642-protein vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 1.735e-29
Identity = 66/142 (46.48%), Postives = 85/142 (59.86%), Query Frame = 0 
Query:   37 TAHVRVIKSSGCWSLVG--RTGRQQDLSLGNGCVYTGTIIHEFLHAIGFYHEQSRPDRDSYIRINWGDIQSGREHNFNIQKN--INSLGIKYDPKSVMHYSNGAFAKSRGLKTIEWKADPSMSLGGRV-LTASDKQQINLKY 173
            T ++ V K SGCWS VG  R G+Q+ LS+G  C    T+ HEFLHA+GF+HEQSR DRD Y+RI W  I SGREHNFN   +   +SL + YD  SVMHYS  AF        +   +D    +G R+  + SD  ++N  Y
Sbjct:  113 TNYISVFKGSGCWSSVGNRRVGKQE-LSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLY 253
The following BLAST results are available for this feature:
BLAST of TCONS_00071642-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B1.735e-2946.48Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
back to top