TCONS_00070951-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070951-protein
Unique NameTCONS_00070951-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length440

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070951-protein ID=TCONS_00070951-protein|Name=TCONS_00070951-protein|organism=Clytia hemisphaerica|type=polypeptide|length=440bp
MASGSTLQKAIDLVKQATEKDKAGEYQEALSLYEHGVEYFLHAIKYEAQN
DRSKESIRAKCIQYLDRAEKLKQFIADDKKKPAKAAAGGSGGKSKGGDDD
SDSEENPEDKKFKDQLGGAIVMETPNIKWDDVAGLEAAKEALKEAVILPI
KFPHLFTGKRQPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDL
VSKWLGESERLVKTLFQMARDHKPSIIFIDEVDSLCSSRSDNESESARRI
KTEFLVQMQGVGVDNDGVLVLGATNIPWVLDSAIRRRFEKRIYIPLPEAP
ARQHMFNLHIGSTPHSIGDKDFKELAKVSNGYSGADISIVVRDALMQPVR
KVQSATHFKKVRGPSRNDPDVTVDDLLTPCSPGDPNAIAMNWMEVDGDKL
LEPVVSFTDMKRSLHSIRPTVNEEDLIKLKKFTEDFGQEG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044099XLOC_044099Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070951TCONS_00070951Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR007330MIT
IPR015415Vps4_C
IPR003959ATPase_AAA_core
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 162..298
e-value: 1.1E-20
score: 84.7
IPR007330MITSMARTSM00745smartcoord: 3..82
e-value: 1.2E-24
score: 97.8
IPR007330MITPFAMPF04212MITcoord: 7..73
e-value: 1.9E-24
score: 85.4
IPR007330MITSUPERFAMILY116846MIT domaincoord: 3..90
IPR015415Vps4 oligomerisation, C-terminalPFAMPF09336Vps4_Ccoord: 377..437
e-value: 1.3E-26
score: 92.2
NoneNo IPR availableGENE3D1.10.8.60coord: 302..439
e-value: 2.1E-17
score: 62.5
NoneNo IPR availableGENE3D3.40.50.300coord: 101..301
e-value: 2.1E-57
score: 193.8
NoneNo IPR availableGENE3D1.20.58.280coord: 1..81
e-value: 1.5E-19
score: 69.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..115
NoneNo IPR availableCDDcd02678MIT_VPS4coord: 5..74
e-value: 5.61231E-34
score: 121.218
NoneNo IPR availableCDDcd00009AAAcoord: 133..296
e-value: 2.90318E-28
score: 107.617
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 166..296
e-value: 9.5E-41
score: 139.2
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 268..287
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 125..433

Blast
[Close]
BLAST of TCONS_00070951-protein vs. Swiss-Prot (Human)
Match: VPS4B (Vacuolar protein sorting-associated protein 4B OS=Homo sapiens GN=VPS4B PE=1 SV=2)

HSP 1 Score: 691.804 bits (1784), Expect = 0.000e+0
Identity = 333/444 (75.00%), Postives = 382/444 (86.04%), Query Frame = 0 
Query:    1 MASGS-TLQKAIDLVKQATEKDKAGEYQEALSLYEHGVEYFLHAIKYEAQNDRSKESIRAKCIQYLDRAEKLKQFIADDKKKPAKAAAGG--SGGKSKGGDDDSDSE-ENPEDKKFKDQLGGAIVMETPNIKWDDVAGLEAAKEALKEAVILPIKFPHLFTGKRQPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLGESERLVKTLFQMARDHKPSIIFIDEVDSLCSSRSDNESESARRIKTEFLVQMQGVGVDNDGVLVLGATNIPWVLDSAIRRRFEKRIYIPLPEAPARQHMFNLHIGSTPHSIGDKDFKELAKVSNGYSGADISIVVRDALMQPVRKVQSATHFKKVRGPSRNDPDVTVDDLLTPCSPGDPNAIAMNWMEVDGDKLLEPVVSFTDMKRSLHSIRPTVNEEDLIKLKKFTEDFGQEG 440
            M+S S  LQKAIDL  +A ++DKAG Y+EAL LY+H V+YFLH +KYEAQ D++K+SIRAKC +YLDRAEKLK+++ + +KK  K    G  S    KG D D + E ++PE KK ++QL GAIV+E PN+KW DVAGLE AKEALKEAVILPIKFPHLFTGKR PWRGILLFGPPGTGKSYLAKAVATEANNSTFFS+SSSDLVSKWLGESE+LVK LFQ+AR++KPSIIFIDE+DSLC SRS+NESE+ARRIKTEFLVQMQGVGVDNDG+LVLGATNIPWVLDSAIRRRFEKRIYIPLPE  AR  MF LH+G+T +S+ + DF+EL + ++GYSGADISI+VRDALMQPVRKVQSATHFKKVRGPSR DP+  VDDLLTPCSPGDP AI M WM+V GDKLLEPVVS +DM RSL + +PTVNE DL+KLKKFTEDFGQEG
Sbjct:    1 MSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMSDMLRSLSNTKPTVNEHDLLKLKKFTEDFGQEG 444
The following BLAST results are available for this feature:
BLAST of TCONS_00070951-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VPS4B0.000e+075.00Vacuolar protein sorting-associated protein 4B OS=... [more]
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