TCONS_00070747-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070747-protein
Unique NameTCONS_00070747-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length377

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070747-protein ID=TCONS_00070747-protein|Name=TCONS_00070747-protein|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
MKTMNFEFGNVSIKLPVKAGSKEPPNPFELAFDLEFNEKKIGSFQLTLEG
FDVGFELRDFSKNSLSFKPSHYETESQSSMDEDLEQESDNEQEENNSLIG
RELRKRSPKNYNEETEDCFEGKQNSNHQNRQTRRIVKEIKKFQCDGCGAE
YRSSTKLRIHHDTVHKGLRPFECQECGKKFGRKDTLGNHLKLHEKDKQLN
LQLCSPAIPANQIVCVVDNMPRKQMKENVQEPDSKQNEESFKKEKVKYIE
CEDCGLCFAQNYKYKIHHDTVHKGLRPFECQECGKTFGRKDVLGRHIKKL
HTKDKTYNYKCQVCDECFSLESDLILHSTTIHANSEIAHEAEVNANSEIS
HEAEVMATLPTFTAFLNEDLSLSDKNC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044023XLOC_044023Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070747TCONS_00070747Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..101
NoneNo IPR availableGENE3D3.30.160.60coord: 318..342
e-value: 0.012
score: 15.1
NoneNo IPR availableGENE3D3.30.160.60coord: 185..261
e-value: 2.0E-9
score: 37.2
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 278..299
e-value: 3.3E-4
score: 20.4
coord: 171..195
e-value: 5.1E-4
score: 19.8
NoneNo IPR availableGENE3D3.30.160.60coord: 168..184
e-value: 2.6E-9
score: 36.5
NoneNo IPR availableGENE3D3.30.160.60coord: 289..317
e-value: 2.7E-13
score: 49.5
coord: 262..288
e-value: 3.4E-13
score: 49.2
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 250..272
e-value: 0.019
score: 15.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..130
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 249..272
e-value: 6.7
score: 14.8
coord: 142..165
e-value: 0.73
score: 18.9
coord: 278..301
e-value: 0.0029
score: 26.8
coord: 309..332
e-value: 0.037
score: 23.2
coord: 171..193
e-value: 0.0053
score: 26.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 144..165
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 280..301
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 311..332
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 173..193
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 251..272
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 249..277
score: 11.344
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 171..198
score: 13.775
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 278..306
score: 14.295
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 309..337
score: 10.762
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 142..170
score: 12.3
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 140..193
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 272..327
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 247..281
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 87..167
e-value: 1.2E-8
score: 34.5

Blast
[Close]
BLAST of TCONS_00070747-protein vs. Swiss-Prot (Human)
Match: ZN782 (Zinc finger protein 782 OS=Homo sapiens GN=ZNF782 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 4.520e-24
Identity = 68/201 (33.83%), Postives = 96/201 (47.76%), Query Frame = 0 
Query:  130 RQTRRIVKEIKKFQCDGCGAEYRSSTKLRIHHDTVHKGLRPFECQECGKKFGRKDTLGNHLKLHEKDKQLNLQLCSPAIPANQIVCVVDNMPRKQMKENVQEPDSKQNEESFKKEKVKYIECEDCGLCFAQNYKYKIHHDTVHKGLRPFECQECGKTFGRKDVLGRHIKKLHTKDKTYNYKCQVCDECFSLESDLILHSTT 330
            R  RR     + ++CD CG  ++  + LR HH T H G +P++C +CGK FG+K  L  H ++H  +K      C  A                  K N++        E       K  +CE+CG  F Q    + H  T H G +P+EC ECGK F  K VL +H ++ HT +K YN  C  C E FS +S+L +H  T
Sbjct:  494 RNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRT-HTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGEKPYKCNHCGEAF---------------SQKSNLRVHHRTHTGE-------KPYQCEECGKTFRQKSNLRGHQRT-HTGEKPYECNECGKAFSEKSVLRKH-QRTHTGEKPYN--CNQCGEAFSQKSNLRVHQRT 667

HSP 2 Score: 95.1301 bits (235), Expect = 3.752e-21
Identity = 65/201 (32.34%), Postives = 94/201 (46.77%), Query Frame = 0 
Query:  130 RQTRRIVKEIKKFQCDGCGAEYRSSTKLRIHHDTVHKGLRPFECQECGKKFGRKDTLGNHLKLHEKDKQLNLQLCSPAIPANQIVCVVDNMPRKQMKENVQEPDSKQNEESFKKEKVKYIECEDCGLCFAQNYKYKIHHDTVHKGLRPFECQECGKTFGRKDVLGRHIKKLHTKDKTYNYKCQVCDECFSLESDLILHSTT 330
            R+ +R     K ++CDGC   + + + LRIH  T H G +PFEC ECGK F  K  L  H + H  +K      C  +      +  + N  R    E                   +  +C++CG  F      + HH T H G +P++C +CGK FG+K  L  H  ++HT +K   YKC  C E FS +S+L +H  T
Sbjct:  410 RKHQRTHTGEKPYKCDGCDKAFSAKSGLRIHQRT-HTGEKPFECHECGKSFNYKSILIVHQRTHTGEKPFECNECGKSFSH---MSGLRNHRRTHTGE-------------------RPYKCDECGKAFKLKSGLRKHHRT-HTGEKPYKCNQCGKAFGQKSQLRGH-HRIHTGEKP--YKCNHCGEAFSQKSNLRVHHRT 583

HSP 3 Score: 83.9593 bits (206), Expect = 1.775e-17
Identity = 54/177 (30.51%), Postives = 81/177 (45.76%), Query Frame = 0 
Query:  128 QNRQTRRIVKEIKKFQCDGCGAEYRSSTKLRIHHDTVHKGLRPFECQECGKKFGRKDTLGNHLKLHEKDKQLNLQLCSPAIPANQIVCVVDNMPRKQMKENVQEPDSKQNEESFKKEKVKYIECEDCGLCFAQNYKYKIHHDTVHKGLRPFECQECGKTFGRKDVLGRHIKKLHTKD 304
            Q R   RI    K ++C+ CG  +   + LR+HH T H G +P++C+ECGK F +K  L  H + H  +K      C  A     ++       RK  + +  E               K   C  CG  F+Q    ++H  T H G +P++C +CG+TF +K  L  H +K H  D
Sbjct:  548 QLRGHHRIHTGEKPYKCNHCGEAFSQKSNLRVHHRT-HTGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECGKAFSEKSVL-------RKHQRTHTGE---------------KPYNCNQCGEAFSQKSNLRVHQRT-HTGEKPYKCDKCGRTFSQKSSLREH-QKAHPGD 699
The following BLAST results are available for this feature:
BLAST of TCONS_00070747-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN7824.520e-2433.83Zinc finger protein 782 OS=Homo sapiens GN=ZNF782 ... [more]
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