TCONS_00069599-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069599-protein
Unique NameTCONS_00069599-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1918

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069599-protein ID=TCONS_00069599-protein|Name=TCONS_00069599-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1918bp
MQLKSGPSKDDRKKRLELLLQQQADNDEIETIHNNSSVVQKKQVPERIDL
ISPAPSNHSNSNGATPSPDIIDNTPVEIPDEINCTACSKKIKWKVKKVCK
HPRLGVILCKSCLKFINSNDYARDEQGVEEFCTWCGDGGNLVCCDFCEKA
YCKHCIKRNLGKPFLKTLLEATEEVKWKCFHCDQSQISVYISQCSIMMNH
VHTYRAHESTIEVKKTHVGDGLSLKDREKRLKHASDAISKTADSQVKMKS
SFTEQNSGEPKANVKTEEPKIKQEKEKDKKKSVTVVLSSSEESDEEIVVI
SKSGKKTVLNKAVLMAAQELLNKKGDSDTKKESKKKQDPLENKEEEEAKE
KPKKTKKKLENFMRLSLSNSKKQSEPSSESDSPPERSSSSESSDDEVLSK
KKKREMEIVDGVVIDGEKPGPSXSKKKKKEMEIVDGVVIDGEKPGPSGIR
SKRKSKKRKEKVVKNQDASSDEDEFIPSIEALHEKRREEAKEQITNKMLG
PEPTVKFIDQLPIKPTKTARRSNEGSNSHSPVVDKENNANESDSTVKDTD
DKNVEDPENTSKETSEEVVEKADESDDETIGSPPPLKELSEKALSCSVSL
TKLAFPVNNESLDKEDSGETKEDEVVDKHTEADNDVEMNEPEIDSDSGEK
DIDSNNENNEIDDSNKENNEESKHGKKEDEKKEIDESGESEGEDKKRSEN
ENEDENEDEDEDEKEQIPPESDDSDDDESQPKQKFLRKRKPKDDSNEDSD
VQEVQPKKKKQRQKNKSDSDVEEVQQDAEVVNSDDSDFEEATPKRSTRQS
RRTKGKKKDGKKATKKKKKNADDDDAETVSSGSDVQTKSTRRRRRKQSDS
SFEEISSDDSDDDEIQHTIESESDESSDASIIITRKKNQKDKGKKKKGGR
GKKKKKKNSSDEDEESDEEGKSPTKGRKKIRKIMKDNQLTEETRHARELE
EQRRQRLLDRTAKDRKEYTKVLEISEGEYVLERNKDKQPLVSVSADINKH
LKPHQRKGIQFMYDCCIESINGYKKGDEGGGCLLAHCMGLGKTLQIVSFT
STIEKSENIKMKRFLIVAPLNTVLNWEQEYEKWLSVEDRMDVYVMSRCNG
MKDRVRTLKEWFEDGGALIIGYEMYRNLVNFTFVKGKKMKEQITEYLVDP
GPDLVVCDEGHILRNNTSAISIAMNKVKTRRRIVLTGTPLQNNLPEYHVM
VDFVKPNLLGTKKEFLNRFANPINNGRCSNSTPRDVRIMKQRCHVLYQLL
SGCVQRQDYSVLTPFLPMKREYTIFVRMQPKQTKMYQHYLENFVYQDAMN
KLKGSSLFSDFHCLSRIWCHPWSLHLERLRRLARQKSPDSMEEFLDDNEE
SSASESEGKKPWDENTDSEEENEDKRRKRRKKFDSSDEETSASEREDEDE
KPTMVAPAASARATRASRRAGDIAAVDLSEMENGDSNSTDADVKTRGSLR
SGVNFKDGAVKSEDSKEKEYDERKSANEFSEWYDEFLTQEDETNVELSGK
LVIMLEIIANAEVVGDKILVFTQSLASLDLIESALGGGSIGGNQLNWCRG
IDYFRMDGSTPVQKRKRWSDTFNDPDNDKCRLFLISTKAGSLGINMVAAN
RVIIFDCSWNPSHDVQSVFRVFRFGQEKPVYVYRLIAQGTMEEKVYDRQI
TKLAVASRVVDEMQIERHFTHEEIRELYSFRPEAIGPNPETPQLPKDPLL
AEVLQRQHPQYIVRYHEHDLLLANVQNEEMSEEEKQQAWKEYEDEKNMSA
SRLQYRQNLPPVQGGAESFQQMMASQQQMVEKRMQQFYNPNTGVRFNIVV
PSNLSPSEQAIYEAAIRRNIVSKLGNSAAGGTLQNIRLPATVGAQSSYNQ
LPANRIVNVNTGAQQQTLRFHSANPQQRHNNGPSSVVRVLAPNDTARQPI
RPPLDPSKFPPPPINNLK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043343XLOC_043343Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069599TCONS_00069599Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR000330SNF2_N
IPR013083Znf_RING/FYVE/PHD
IPR025766ADD
IPR027417P-loop_NTPase
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 757..777
NoneNo IPR availableCOILSCoilCoilcoord: 695..715
NoneNo IPR availableGENE3D3.40.50.300coord: 1487..1663
e-value: 7.4E-29
score: 99.7
NoneNo IPR availableGENE3D3.40.50.10810coord: 968..1256
e-value: 4.7E-44
score: 149.8
NoneNo IPR availableCDDcd00046DEXDccoord: 1031..1189
e-value: 5.89009E-12
score: 64.666
NoneNo IPR availableCDDcd00079HELICccoord: 1498..1633
e-value: 5.4226E-19
score: 84.982
NoneNo IPR availableCDDcd11726ADDz_ATRXcoord: 80..183
e-value: 2.22549E-43
score: 154.771
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 997..1215
e-value: 5.4E-21
score: 85.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1023..1207
score: 17.369
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 1539..1625
e-value: 5.0E-16
score: 69.2
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 1500..1625
e-value: 2.9E-15
score: 56.5
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1506..1678
score: 14.343
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 983..1305
e-value: 9.9E-57
score: 192.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 121..189
e-value: 2.3E-6
score: 26.7
IPR025766ADD domainPROSITEPS51533ADDcoord: 72..210
score: 13.345
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 979..1256
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1152..1205
coord: 1490..1674
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 127..193

Blast
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BLAST of TCONS_00069599-protein vs. Swiss-Prot (Human)
Match: ATRX (Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=5)

HSP 1 Score: 444.121 bits (1141), Expect = 1.361e-126
Identity = 226/454 (49.78%), Postives = 310/454 (68.28%), Query Frame = 0 
Query:  922 SPTKGRKKIRKIMKDNQLTEETRHARELEEQRRQRLLDRTAKDRKEYTKVLEISEG---------EYVLERNKD-KQPLVSVSADINKHLKPHQRKGIQFMYDCCIESINGYKKGDEGGGCLLAHCMGLGKTLQIVSFTSTIEKSENIKMKRFLIVAPLNTVLNWEQEYEKW---LSVEDRMDVYVMSRCNGMKDRVRTLKEWFEDGGALIIGYEMYRNLVNFTFVKGKKMKEQITEYLVDPGPDLVVCDEGHILRNNTSAISIAMNKVKTRRRIVLTGTPLQNNLPEYHVMVDFVKPNLLGTKKEFLNRFANPINNGRCSNSTPRDVRIMKQRCHVLYQLLSGCVQRQDYSVLTPFLPMKREYTIFVRMQPKQTKMYQHYLENFV----YQDAMNKLKGSSLFSDFHCLSRIWCHPWSLHLERLRRLARQK-SPDSMEEFL-DDNEESSASES 1356
            SP KGRKKIRKI+KD++L  ET++A + EE+RR+R+     ++R++  +V+EI +          + VL+ +++ K+PLV V  ++   LKPHQ  G+QFM+DCC ES+   KK   G GC+LAHCMGLGKTLQ+VSF  T+   + +     L+V PLNT LNW  E+EKW   L  +++++V  ++     ++R   L+ W EDGG +IIGYEMYRNL     VK +K+KE   + LVDPGPD VVCDEGHIL+N  SA+S AMN +++RRRI+LTGTPLQNNL EYH MV+F+K NLLG+ KEF NRF NPI NG+C++ST  DVR+MK+R H+LY++L+GCVQR+DY+ LT FLP K EY + VRM   Q K+YQ+YL++        +      G+ LF DF  LSRIW HPW L L+ + +  +     DSM+EF+  D++E+S S S
Sbjct: 1472 SPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRI-AEREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLS 1923

HSP 2 Score: 124.405 bits (311), Expect = 4.129e-28
Identity = 46/121 (38.02%), Postives = 79/121 (65.29%), Query Frame = 0 
Query:   82 INCTACSKKIK-WKVKKVCKHPRLGVILCKSCLKFINSNDYARDEQGVEEFCTWCGDGGNLVCCDFCEKAYCKHCIKRNLGKPFLKTLLEATEEVKWKCFHCDQSQISVYISQCSIMMNHV 201
            ++CTAC +++  ++   + +HP L V++CK+C K+  S+D +RD  G++E C WC +GGNL+CCDFC  A+CK CI RNLG+  L T+++  E  +W C+ C    +   ++ C+ +  ++
Sbjct:  169 VSCTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMD--ENNQWYCYICHPEPLLDLVTACNSVFENL 287
The following BLAST results are available for this feature:
BLAST of TCONS_00069599-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATRX1.361e-12649.78Transcriptional regulator ATRX OS=Homo sapiens GN=... [more]
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