TCONS_00068781-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00068781-protein
Unique Name	TCONS_00068781-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	274

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00068781-protein ID=TCONS_00068781-protein|Name=TCONS_00068781-protein|organism=Clytia hemisphaerica|type=polypeptide|length=274bp
MENNLATTTFEECYSSFEGLPSKLNEVYISKSERINQLVILFPGDVQECY
KEMMLRRDTRYKEFCYENCTKWLHQVFNDSCIFVVKPSRMHLHTFACYEH
FLDTNDVGMPNYKTEDKPKAWLHLRALLQSCTSKYDADKTWNDKPISLVS
FSKGCIVLNQLVLELPLLVETQKQSLLTNIQTFCWLDGGVPGNSGAYPRN
EKCIELLSKYVPNIEVHTTPYQMKDPLRVWISKEKKRFVQLLKKYKAGLI
DCSYFENGVPDLNMHFNLIHSFRR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042891	XLOC_042891	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00068781	TCONS_00068781	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018881	UPF0565

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 273..274
IPR018881	Uncharacterised protein family UPF0565	PFAM	PF10561	UPF0565	coord: 31..135 e-value: 2.9E-24 score: 85.7 coord: 141..247 e-value: 3.7E-28 score: 98.5

Blast

[Close]

BLAST of TCONS_00068781-protein vs. Swiss-Prot (Human)
Match: CB069 (UPF0565 protein C2orf69 OS=Homo sapiens GN=C2orf69 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 9.939e-36
Identity = 89/286 (31.12%), Postives = 134/286 (46.85%), Query Frame = 0

Query:   39 VILFPGDVQECYKEMMLRRDTRYK--EFCYENCTKWLHQVFNDSCIFVVKPSRMHLHTFACYEHFLDTNDVGMPNYKTEDKPKAWLHLRALL-------QSCTSK-----YDADK-------------------------------------TWNDKPISLVSFSKGCIVLNQLVLELPLLVETQK-QSLLTNIQTFCWLDGGVPGNSGAYPRNEKCIELLSKYVPNIEVHTTPYQMKDPLRVWISKEKKRFVQLLKKYKAGLIDCSYFENGVPDLNMHFNLIHSF 272
            V+ FPGDVQ  Y E+M R    Y+   +  EN    L   F +S I+V+K SRMHLH F+CY++F+ +N  G P + T+    A+ HL  LL       Q+  SK     ++ D                                      + ND   +L+ FSKGC+VLNQL+ EL    + +   + + +I+T  WLDGG  G S  +    + ++  ++    +  H TPYQ++DP+R WI KE K+FVQ+L      +    +F    P +  HF +   F
Sbjct:  103 VLYFPGDVQN-YHEIMTRHPENYQWENWSLENVATILAHRFPNSYIWVIKCSRMHLHKFSCYDNFVKSNMFGAPEHNTDFG--AFKHLYMLLVNAFNLSQNSLSKKSLNVWNKDSIASNCRSSPSHTTNGCQGEKVRTCEKSDESAMSFYPPSLNDASFTLIGFSKGCVVLNQLLFELKEAKKDKNIDAFIKSIRTMYWLDGGHSGGSNTWVTYPEVLKEFAQTGIIVHTHVTPYQVRDPMRSWIGKEHKKFVQILGDLGMQVTSQIHFTKEAPSIENHFRVHEVF 385

The following BLAST results are available for this feature:

BLAST of TCONS_00068781-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00068781-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CB069	9.939e-36	31.12	UPF0565 protein C2orf69 OS=Homo sapiens GN=C2orf69...	[more]

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TCONS_00068781-protein (polypeptide) - C. hemisphaerica