TCONS_00068677-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068677-protein
Unique NameTCONS_00068677-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length515

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068677-protein ID=TCONS_00068677-protein|Name=TCONS_00068677-protein|organism=Clytia hemisphaerica|type=polypeptide|length=515bp
MPPPSKPGERQKLFKNQDKDTESLRQRRNEVSVVLRKAKREEALQKRRLV
PNTPEDDEKYNKFMDASLQMIVENAAHGDPATRLSAVQAARKLLSKDRHP
PIDELIKSGILPILVECLQFDDNASLQFEAAWALTNIASGSSAQTQAVVH
AGAVAHFMRLLESKHQNVCEQAVWALGNIIGDGPVLRDFVIRHGVVAPLL
TFIDPNVPLTFLRNVTWVIVNLCRNKEPPPPMETIQQLLPALGVLIHHND
LDILVDSVWALSYLTDCGNDHIQAVLQVGVVPKLVSFLTHTEIRLQTAAL
RAVGNIVTGTDEQTQSVLNNGALGQFPSLLSHQKEKIRKEAVWFLSNITA
GTEEQVQQVIDAGLIPFVIKALTEGEFQTQKEAAWAISNLTVSGVPGQVA
YAVQEGCIPPFCNLLSVQDPQIIHIVLDGLTNIMKMAGDDVEKICIIIEE
CGGLDRIEVLQNHENPDIYKLAYQIIEKYFSNDVENEDETVVPEQNPQGQ
YQFNAKASETSKFSL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042847XLOC_042847Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068677TCONS_00068677Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR002652Importin-a_IBB
IPR024931Importing_su_alpha
IPR032413Arm_3
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008565protein transporter activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0006606protein import into nucleus
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006606 protein import into nucleus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008565 protein transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 310..350
e-value: 2.3E-5
score: 33.9
coord: 98..139
e-value: 9.9E-10
score: 48.3
coord: 268..308
e-value: 4.3E-6
score: 36.3
coord: 352..392
e-value: 5.1E-6
score: 36.0
coord: 227..266
e-value: 11.0
score: 13.0
coord: 141..181
e-value: 5.7E-9
score: 45.8
coord: 183..224
e-value: 78.0
score: 6.3
coord: 394..435
e-value: 0.026
score: 23.7
IPR000225ArmadilloPFAMPF00514Armcoord: 353..391
e-value: 3.9E-9
score: 36.2
coord: 269..307
e-value: 1.4E-8
score: 34.4
coord: 141..179
e-value: 3.0E-12
score: 46.0
coord: 100..139
e-value: 6.4E-12
score: 45.0
coord: 184..224
e-value: 1.8E-5
score: 24.5
coord: 310..350
e-value: 1.3E-8
score: 34.5
coord: 397..433
e-value: 1.0E-5
score: 25.3
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 109..152
score: 9.992
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 5..485
e-value: 9.9E-104
score: 347.0
IPR002652Importin-alpha, importin-beta-binding domainPFAMPF01749IBBcoord: 10..88
e-value: 6.8E-16
score: 58.3
IPR002652Importin-alpha, importin-beta-binding domainPROSITEPS51214IBBcoord: 1..57
score: 15.296
IPR024931Importin subunit alphaPIRSFPIRSF005673Importin_alphacoord: 1..515
e-value: 3.0E-202
score: 670.5
IPR032413Atypical Arm repeatPFAMPF16186Arm_3coord: 442..494
e-value: 4.8E-24
score: 83.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 495..515
NoneNo IPR availableCDDcd00020ARMcoord: 317..434
e-value: 1.70792E-21
score: 88.9107
NoneNo IPR availableCDDcd00020ARMcoord: 103..224
e-value: 4.6091E-27
score: 104.319
NoneNo IPR availableCDDcd00020ARMcoord: 238..350
e-value: 9.82596E-26
score: 100.852
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 9..483

Blast
[Close]
BLAST of TCONS_00068677-protein vs. Swiss-Prot (Human)
Match: IMA4 (Importin subunit alpha-4 OS=Homo sapiens GN=KPNA3 PE=1 SV=2)

HSP 1 Score: 681.789 bits (1758), Expect = 0.000e+0
Identity = 338/517 (65.38%), Postives = 409/517 (79.11%), Query Frame = 0 
Query:    4 PSKPGERQKLFKNQDKDTESLRQRRNEVSVVLRKAKREEALQKRRLVPN--TPEDDEKYNKF--MDASLQMIVENAAHGDPATRLSAVQAARKLLSKDRHPPIDELIKSGILPILVECLQFDDNASLQFEAAWALTNIASGSSAQTQAVVHAGAVAHFMRLLESKHQNVCEQAVWALGNIIGDGPVLRDFVIRHGVVAPLLTFIDPNVPLTFLRNVTWVIVNLCRNKEPPPPMETIQQLLPALGVLIHHNDLDILVDSVWALSYLTDCGNDHIQAVLQVGVVPKLVSFLTHTEIRLQTAALRAVGNIVTGTDEQTQSVLNNGALGQFPSLLSHQKEKIRKEAVWFLSNITAGTEEQVQQVIDAGLIPFVIKALTEGEFQTQKEAAWAISNLTVSGVPGQVAYAVQEGCIPPFCNLLSVQDPQIIHIVLDGLTNIMKMAGDDVEKICIIIEECGGLDRIEVLQNHENPDIYKLAYQIIEKYFSNDVENEDETVVPEQNPQGQYQFNAKAS-ETSKFSL 515
            PS    R K FKN+ +D E++R+ RNEV+V LRK KR+E L K+R VP   + ED +    F   + +L+ I++NA   +P  +LSAVQAARKLLS DR+PPID+LIKSGILPILV+CL+ DDN SLQFEAAWALTNIASG+SAQTQAVV + AV  F+RLL S HQNVCEQAVWALGNIIGDGP  RD+VI  GVV PLL+FI P++P+TFLRNVTWVIVNLCRNK+PPPPMET+Q++LPAL VLI+H D++ILVD+VWALSYLTD GN+ IQ V+  GVVP LV  L+H E+++QTAALRAVGNIVTGTDEQTQ VLN   L  FP+LLSH KEKI KEAVWFLSNITAG ++QVQ VIDAGLIP +I  L +G+F TQKEAAWAISNLT+SG   QV Y VQ+  IPPFCNLLSV+D Q++ +VLDGL NI+ MAGD+   I  IIEECGGL++IEVLQ HEN DIYKLA++II++YFS D  +ED  ++PE    G Y F+  A+ +T +F+ 
Sbjct:    5 PSLENHRIKSFKNKGRDVETMRRHRNEVTVELRKNKRDEHLLKKRNVPQEESLEDSDVDADFKAQNVTLEAILQNATSDNPVVQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQAVVQSNAVPLFLRLLRSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVIVNLCRNKDPPPPMETVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVIDSGVVPFLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDVLSHFPNLLSHPKEKINKEAVWFLSNITAGNQQQVQAVIDAGLIPMIIHQLAKGDFGTQKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLDGLKNILIMAGDEASTIAEIIEECGGLEKIEVLQQHENEDIYKLAFEIIDQYFSGDDIDEDPCLIPEATQGGTYNFDPTANLQTKEFNF 521
The following BLAST results are available for this feature:
BLAST of TCONS_00068677-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IMA40.000e+065.38Importin subunit alpha-4 OS=Homo sapiens GN=KPNA3 ... [more]
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