TCONS_00068378-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068378-protein
Unique NameTCONS_00068378-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length814

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068378-protein ID=TCONS_00068378-protein|Name=TCONS_00068378-protein|organism=Clytia hemisphaerica|type=polypeptide|length=814bp
MVEEKTETPEKSFVEQLKENDIYTEFIDDTFDAKEYANTVIESHIIGDAL
AKLSTGIELLNKELQTQVADHHEDLLSQATGIETLEGVLQSIHTRCQSLV
KSVQRVRSQIVEPYNRISSRTKQLRRLQTSCDYLRRIIRVILVSKRLQIQ
LNGGSREITKAAQSLNELEFVLDGVDLSGIQIVEKDLAQIKKARVEVNKQ
AKEMLKNGLNSQNQTVIGTALQVFHNLGSLYNEITNIMEMFTRTMEKYVD
ESLDITKLMTKTGINAGGISGPGRAAMPLAGSTWHNGLWDNLELLMNNMF
SLCQKVFLMEKVLVKKKDPSTHVSYIETFCEDNCSVLFKDFWNSICSALR
SSFDKETQDSTHLKQAFEGEYPKLLRLFNDFWSQVIGLVDPKQINIQHQQ
QQQVQSQRDVKVGFHGNETSALTSLKSCMQPFETAYLSRSLSRLFDSINL
VFPTESTAVPSKDEVGAIVKTISSELNVASVDEHLMILVAKNVSKTVQLY
STKCEQLIVTTSEAGQLGGGLTNAQIRNVSVVNSLGYLRTGITEILLELD
YPPQEAIVTLDKAIVRINDFMDVSLSLLLSSIMRTLETKMLKMSNENFAI
SAQSFHETQEVQSCSNYVTDIQNFISSIQSDYLSLYTCTDFLLERLKVLA
SRVLQLFVRYACLTRQLSEGGKLKMAADMTQLEFAVTPLCKRFEDLGHEY
KQYRAFRPLLFQTLNDIPSNPNLGESLTFSTVLHFLFSQAPSQFISPHTF
SGWTVTQYSDWLDEHNDESERINLLRKTIDSYATKMEVDGQADLSPVYTI
MKKLLRQYDQNNIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042670XLOC_042670Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068378TCONS_00068378Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019465Cog5
IPR016024ARM-type_fold
Vocabulary: Cellular Component
TermDefinition
GO:0017119Golgi transport complex
Vocabulary: Biological Process
TermDefinition
GO:0006891intra-Golgi vesicle-mediated transport
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
cellular_component GO:0017119 Golgi transport complex
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 180..207
NoneNo IPR availableGENE3D1.20.120.330coord: 47..219
e-value: 0.0034
score: 16.5
IPR019465Conserved oligomeric Golgi complex subunit 5PFAMPF10392COG5coord: 25..147
e-value: 4.3E-27
score: 94.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 698..775
coord: 572..668
coord: 196..232
coord: 15..97
coord: 289..387

Blast
[Close]
BLAST of TCONS_00068378-protein vs. Swiss-Prot (Human)
Match: COG5 (Conserved oligomeric Golgi complex subunit 5 OS=Homo sapiens GN=COG5 PE=1 SV=3)

HSP 1 Score: 689.108 bits (1777), Expect = 0.000e+0
Identity = 353/809 (43.63%), Postives = 516/809 (63.78%), Query Frame = 0 
Query:   14 VEQLKENDIYTEFIDDTFDAKEYANTVIESHIIGDALAKLSTGIELLNKELQTQVADHHEDLLSQATGIETLEGVLQSIHTRCQSLVKSVQRVRSQIVEPYNRISSRTKQLRRLQTSCDYLRRIIRVILVSKRLQIQLNGGSREITKAAQSLNELEFVLDGVDLSGIQIVEKDLAQIKKARVEVNKQAKEMLKNGLNSQNQTVIGTALQVFHNLGSLYNEITNIMEMFTRTMEKYVDESLDITKLMTKTGINAGGISGPGRAAMPLAGST--WHNGLWDNLELLMNNMFSLCQKVFLMEKVLVKKKDPSTHVSYIETFCEDNCSVLFKDFWNSICSALRSSFDKETQDSTHLKQAFEGEYPKLLRLFNDFWSQVIGLVDPKQINIQHQQQQQVQSQRDVKVGFHGNETSAL-------------TSLKSCMQPFETAYLSRSLSRLFDSINLVFPTESTAVPSKDEVGAIVKTISSELNVASVDEHLMILVAKNVSKTVQLYSTKCEQLIVTTSEAGQLGGGLTNAQIRNVSVVNSLGYLRTGITEILLELDYPPQEAIVTLDKAIVRINDFMDVSLSLLLSSIMRTLETKMLKMSNENFAISAQSFHETQEVQSCSNYVTDIQNFISSIQSDYLSLYTCTDFLLERLKVLASRVLQLFVRYACLTRQLSEGGKLKMAADMTQLEFAVTPLCKRFEDLGHEYKQYRAFRPLLFQTLNDIPSNPNLGESLTFSTVLHFLFSQAPSQFISPHTFSGWTVTQYSDWLDEHNDESERINLLRKTIDSYATKMEVDGQADLSPVYTIMKKLLRQ 807
            V +L ++  Y++F+++ FD K Y +  I   +I + LAKL+ GI  L++EL  QV   HEDLL+QATGIE+LEGVLQ + TR  +L  +V R++++IVEPYN+I +RT QL RLQ +CD LRRIIR++ +SKRLQ QL GGSREITKAAQSLNEL+++  G+DLSGI+++E DL  I +AR+EV  QAK +L+ GL +QN T +GTALQVF+NLG+L + IT++++ +  T+E+ ++ +LDI K++T+   +A    GPGR+ MP  G+T       W N+E LM++++++C +V  ++KVL KK+DP +H+ +IE   +D    +F  FWNS+  AL S F   T  S  LKQAFEGEYPKLLRL+ND W ++      +Q +   Q         D+ V     E  A               +LK  +QP+E AYLS+SLSRLFD INLVFP      PS DE+  I+KTI+SELNVA+VD +L + V+KNV+KT+QLYS K EQL+ T  +A Q+ G LT  Q RNV+VVNSL  L   +T+                      I+  M+ ++  LL+S+   +E  ++ M  E+F+ S  S  +      CS Y+ ++Q FI+ + SDY   + C DF+ +  + +A R ++LF+R+A L R L EGGK+++AAD  Q+E AV P C+R  DLG  Y+  R+FRPLLFQ    + S+P LG+ + FS ++ FLF++AP++  SP   + W+ T++S WLD+H  E +R+ L+R  +++Y   +      + +PVY IM +LL++
Sbjct:   56 VRELLQDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNLSKRLQGQLQGGSREITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVENQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKDTITSVVDGYCATLEENINSALDI-KVLTQPSQSAVR-GGPGRSTMPTPGNTAALRASFWTNMEKLMDHIYAVCGQVQHLQKVLAKKRDPVSHICFIEEIVKDGQPEIFYTFWNSVTQALSSQFHMATNSSMFLKQAFEGEYPKLLRLYNDLWKRL------QQYSQHIQGNFNASGTTDLYVDLQHMEDDAQDIFIPKKPDYDPEKALKDSLQPYEAAYLSKSLSRLFDPINLVFPPGGRNPPSSDELDGIIKTIASELNVAAVDTNLTLAVSKNVAKTIQLYSVKSEQLLSTQGDASQVIGPLTEGQRRNVAVVNSLYKLHQSVTKA---------------------IHALMENAVQPLLTSVGDAIEAIIITMHQEDFSGSLSSSGKPDV--PCSLYMKELQGFIARVMSDYFKHFECLDFVFDNTEAIAQRAVELFIRHASLIRPLGEGGKMRLAADFAQMELAVGPFCRRVSDLGKSYRMLRSFRPLLFQASEHVASSPALGDVIPFSIIIQFLFTRAPAELKSPFQRAEWSHTRFSQWLDDHPSEKDRLLLIRGALEAYVQSVRSREGKEFAPVYPIMVQLLQK 833
The following BLAST results are available for this feature:
BLAST of TCONS_00068378-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COG50.000e+043.63Conserved oligomeric Golgi complex subunit 5 OS=Ho... [more]
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