TCONS_00068300-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068300-protein
Unique NameTCONS_00068300-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length333

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068300-protein ID=TCONS_00068300-protein|Name=TCONS_00068300-protein|organism=Clytia hemisphaerica|type=polypeptide|length=333bp
MMLRHGTRTLTSNKTNIQRLLQHKDFVVSVFGTNLTKSEIWKCPTKVFDG
NVYIVSQEKDQDRKHTKAAIKRILQSTVVGFDTETAVIFPRRTSSPHLIG
LVQIATENDVILWRLRCKKKYIWNEFPTVLKRILKDRDMMKVGNGTYDDL
KHLYETYNISVSNMVDNQTIAKDIGYNKIGLVALAAQLYGWKINKKEQLS
NWEVPELSESQIQYASTDAWVSLKIYQELSKMSKTLQGDENPIRGTSSFD
HILRQEAKFDADFLLSLDLFGGKMSTKKGDLNESVLKRQRPRLSFDASDY
DLSESLSSNETKLNSKINEVVKREDIPFVYQAV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042625XLOC_042625Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068300TCONS_00068300Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:00084083'-5' exonuclease activity
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006139 nucleobase-containing compound metabolic process
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainSMARTSM0047435exoneu6coord: 57..234
e-value: 2.5E-8
score: 43.7
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 62..232
e-value: 1.9E-24
score: 86.2
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 47..232
e-value: 5.4E-35
score: 120.0
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 42..232
NoneNo IPR availableCDDcd06141WRN_exocoord: 69..229
e-value: 1.90006E-41
score: 142.717

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068300-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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