TCONS_00068255-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068255-protein
Unique NameTCONS_00068255-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length479

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068255-protein ID=TCONS_00068255-protein|Name=TCONS_00068255-protein|organism=Clytia hemisphaerica|type=polypeptide|length=479bp
MDADKKAPPPKEIFENGGEEVFDDPDGILKKKKKNKNKVAPSSQTVRSSA
TINIIRTLKDVVTSEDEKGMAMKRVLELEKELLDMRSSKNESEEEVKGLK
YELGGLQKNFKELKDSSAASLEELEKFEVTRLSDENEALKKENTDLMKQV
ENSMTQQIADQKECELLKTDLKNKTEEMKVLKLQVDEMKSQLLNSISSNN
ESLQVIEEAKKEIKQMTESMKQKEETLKQQITQLENDYKAKEDKINNEKD
SLLKELNEEREKVKVNNSEIKVLKNGIEKLIKEKTDEKSFRIKIAERLKM
IIEEKNTMEGAYKLDLQQVSRDFEDLKKHFVHVTSDKAEMFQKLSDAVFE
KCKKQRWVPDIESENCTNCCEKFSFTLRRHHCRMCGHIFCFKCSDRWLLT
PHSSKRVRACDVCADTYTEQHLDAEPGRDIDMTDAPPQQMYRELRGEEIT
KYEKEYQEDEDAEDDGGPGETSRLLEKGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042604XLOC_042604Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068255TCONS_00068255Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000306Znf_FYVE
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR001841Znf_RING
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 164..191
NoneNo IPR availableCOILSCoilCoilcoord: 129..156
NoneNo IPR availableCOILSCoilCoilcoord: 199..273
NoneNo IPR availableCOILSCoilCoilcoord: 75..109
NoneNo IPR availableGENE3D1.20.5.50coord: 32..160
e-value: 0.0043
score: 16.3
coord: 161..289
e-value: 0.015
score: 14.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 444..479
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 352..419
e-value: 1.9E-19
score: 80.6
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 356..417
e-value: 1.2E-15
score: 57.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 346..427
e-value: 3.2E-18
score: 64.9
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 360..418
score: 12.528
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 366..413
score: 9.686
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 325..416

Blast
[Close]
BLAST of TCONS_00068255-protein vs. Swiss-Prot (Human)
Match: EEA1 (Early endosome antigen 1 OS=Homo sapiens GN=EEA1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 5.744e-19
Identity = 32/58 (55.17%), Postives = 39/58 (67.24%), Query Frame = 0 
Query:  356 RWVPDIESENCTNCCEKFSFTLRRHHCRMCGHIFCFKCSDRWLLTPHSSKRVRACDVC 413
            +W  D E +NC  C + FS T+RRHHCR CG+IFC +CS +  LTP S K VR CD C
Sbjct: 1348 KWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDAC 1405
The following BLAST results are available for this feature:
BLAST of TCONS_00068255-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EEA15.744e-1955.17Early endosome antigen 1 OS=Homo sapiens GN=EEA1 P... [more]
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