TCONS_00068023-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068023-protein
Unique NameTCONS_00068023-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length499

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068023-protein ID=TCONS_00068023-protein|Name=TCONS_00068023-protein|organism=Clytia hemisphaerica|type=polypeptide|length=499bp
AIISNQPEQRSDTSEETVTTSTWIQSISMIIIEGADYVESTLHVPFFHFI
LEVLLVLWIVRLLTGKSYNPKETKLELTKEEEEKLIADWEPEPLVPADSK
IPEYVTKPRLVKGKPSYRININGNDCLNLCTMNFLGFVGNEEVEKAAITT
LRNYGVGSCGPRGFYGTVDVHLDLEKKIAEYLGTEEAILYSYGFSTISSA
IPAYSKRTDVIFCDKGVNFAIQKGISASRSKVYWFDHNDMEDLERKMKEQ
QEKDKKNPKKAVVTRRFLVIEGLYINTGDIASLPKIIELKNKYKVRVFID
ESYSFGVLGKRGCGVTDHYDIPLDQIDLMAVSLEFSLGSVGGFCAGPSFV
IDHQRLSGQGYCFSASLPPLLAVASQTGIELMEKDSSMFKKLENNCKYFR
KQIEGIKGFDIQGDEVSPIVHLYLKDTEELSREDIETKLSQYVDKCQEKG
VGLTSSRYLNDLELYLPPASIRISLNSKLVEDDMDNSTNIMKEIANEMF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042470XLOC_042470Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068023TCONS_00068023Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015422PyrdxlP-dep_Trfase_sub2
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR004839Aminotransferase_I/II
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0030170pyridoxal phosphate binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 371..499
e-value: 9.7E-19
score: 67.8
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 141..370
e-value: 7.9E-36
score: 123.2
IPR004839Aminotransferase, class I/classIIPFAMPF00155Aminotran_1_2coord: 125..485
e-value: 2.6E-43
score: 148.5
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 79..497

Blast
[Close]
BLAST of TCONS_00068023-protein vs. Swiss-Prot (Human)
Match: SPTC1 (Serine palmitoyltransferase 1 OS=Homo sapiens GN=SPTLC1 PE=1 SV=1)

HSP 1 Score: 469.159 bits (1206), Expect = 9.492e-163
Identity = 232/464 (50.00%), Postives = 333/464 (71.77%), Query Frame = 0 
Query:   36 DYVESTLHVPFFHFILEVLLVLWIVRLLTGKSYNPKETKLELTKEEEEKLIADWEPEPLVPADSKIPEYVTKPRLVKGKPSYRININGNDCLNLCTMNFLGFVGNEEVEKAAITTLRNYGVGSCGPRGFYGTVDVHLDLEKKIAEYLGTEEAILYSYGFSTISSAIPAYSKRTDVIFCDKGVNFAIQKGISASRSKVYWFDHNDMEDLERKMKEQQEKDKKNPKKAVVTRRFLVIEGLYINTGDIASLPKIIELKNKYKVRVFIDESYSFGVLGKRGCGVTDHYDIPLDQIDLMAVSLEFSLGSVGGFCAGPSFVIDHQRLSGQGYCFSASLPPLLAVASQTGIELMEKDSSMFKKLENNCKYFRKQIEGIKGFDIQGDEVSPIVHLYLKDTEELSREDIETKLSQYVDKCQEKGVGLTSSRYLNDLELYLPPASIRISLNSKLVEDDMDNSTNIMKEIANEMF 499
            + V++    P +H ILE +L+LWI+RLL  K+Y  +E + +LT +E+E+LI +W+PEPLVP   K    +    +V G PS++  +NG +C+N  + NFLG + N  V+ AA+ +L+ YGVG+CGPRGFYGT DVHLDLE ++A+++ TEEAI+YSYGF+TI+SAIPAYSKR D++F D+   FAIQKG+ ASRS +  F HNDM DLER +KEQ+ +D+KNP+KA VTRRF+V+EGLY+NTG I  LP++++LK KYK R+F++ES SFGVLG+ G GVT+HY I +D IDL++ ++E +L S+GGFC G SFVIDHQRLSGQGYCFSASLPPLLA A+   + +ME++  +F  L+  C    K ++GI G  + G+ +SP  HL L+++     +D+   L + VD+C  + + LT +RYL   E  LPP SIR+ +  +  E++++ + + +KE+A  + 
Sbjct:   12 EMVQALYEAPAYHLILEGILILWIIRLLFSKTYKLQE-RSDLTVKEKEELIEEWQPEPLVPPVPKDHPALNY-NIVSGPPSHKTVVNGKECINFASFNFLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKRGDIVFVDRAACFAIQKGLQASRSDIKLFKHNDMADLERLLKEQEIEDQKNPRKARVTRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHYGINIDDIDLISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIMEENPGIFAVLKEKCGQIHKALQGISGLKVVGESLSPAFHLQLEESTGSREQDVRL-LQEIVDQCMNRSIALTQARYLEKEEKCLPPPSIRVVVTVEQTEEELERAASTIKEVAQAVL 472
The following BLAST results are available for this feature:
BLAST of TCONS_00068023-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPTC19.492e-16350.00Serine palmitoyltransferase 1 OS=Homo sapiens GN=S... [more]
back to top