TCONS_00067823-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067823-protein
Unique NameTCONS_00067823-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length682

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067823-protein ID=TCONS_00067823-protein|Name=TCONS_00067823-protein|organism=Clytia hemisphaerica|type=polypeptide|length=682bp
MADRRAPWKKQRPSIFHGKKDRKNLYRKQSSVSSVESMMMSSPTHHRHNA
SRKTLLGLFIRALFPRLLFLIHGLLCVYIIVKQENDNKYWYLTICLGLLF
LEGIFNVIVRHGKEFHWFCPSAFLYCAVLIVTLTLLREAQIKCLDDNMIC
NSKVGDAQTTCLAEKASCDSKLPGSDFIINFFNGMSFSKRADMIEQTGLL
VLIVGRWLLPQGSISKDQFCQILLIYIGTAADIVEFSEIYKDDDVINLGP
DTVDVLRSCCYVWAFSVLQFSMTIALPEDGLKEEEEDDEEEENQFEQMSY
FRTAKLQNKVAPMSYMQYKSMLREGMNNGSDEGFQLTARRNHQNTRNGTF
QEKYPTLGVENAANKFRSKPAGLTPLALASTSPRGKSSESNGVNNTQQSQ
SNGSLSQRSQTWSTPRQKKISLPHGGRVPTNIGSPPLTERSIGSPMSARS
KKTSVTSRPAMNETVRPTSKGSSTESTNSEQKNFSTGSKSPPIKTWDRLL
ERIPWSNKRKRRENMDFQGLQRKDSTKEDNSLGIGKKEVKGCFYKYLDLI
AILLPVCMQDGPFFILRFVLIAHYNVITGMLPILLTKNALVIIVNIYRIL
ILYCSEPPKEQTELDDPSTRVRAAMDTNQKLSNRASLRAKRASIAVQALT
RMQTQLLGREDASVLRQTRQDEINRQYDDSPA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042357XLOC_042357Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067823TCONS_00067823Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019169Transmembrane_26
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019169Transmembrane protein 26PFAMPF09772Tmem26coord: 533..598
e-value: 1.4E-14
score: 54.1
coord: 59..300
e-value: 5.5E-53
score: 180.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..493
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 511..531

Blast
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BLAST of TCONS_00067823-protein vs. Swiss-Prot (Human)
Match: TMM26 (Transmembrane protein 26 OS=Homo sapiens GN=TMEM26 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.067e-23
Identity = 78/228 (34.21%), Postives = 126/228 (55.26%), Query Frame = 0 
Query:   58 LFIRALFPRLLFLIHGLLCVYIIVKQENDNKYWYLTICLGLLFLEGIFNVIVRHGKEFHWFCPSAFLYCAVLIVTLTLL---REAQ---IKCLDDNMICNSKVGDAQTTCLAEKAS-CDSKLPGSDFIINFFNGMSFSKRADMIEQTGLLVLIVGRWLLP-QGSISKDQFCQILLIYIGTAADIVEF-SEIYKDDDVINLGPDTVDVLRSCCYVWAFSVLQFSMTIAL 276
            +F+ AL  RLLFL+H L+ V+ + + + + +YW L +   LLFLE    +  + G+ + WF P+ FLY   ++ +L LL    E Q   I+    +   + K    QT    E+ S  D  +  +   +N  + +        + QT LL+LI+GRWLLP  G I++DQ  Q+LL+++GTAADI+EF SE  ++ +V N  P  V    +   +W +S+LQF + +A+
Sbjct:    5 VFLNALATRLLFLLHSLVGVWRVTEVKKEPRYWLLALLNLLLFLETALTLKFKRGRGYKWFSPAIFLYLISIVPSLWLLELHHETQYCSIQAEGTSQNTSRKEDFNQTLTSNEQTSRADDLIETAKVFVNNLSTVCEKVWTLGLHQTFLLMLIIGRWLLPIGGGITRDQLSQLLLMFVGTAADILEFTSETLEEQNVRN-SPALV---YAILVIWTWSMLQFPLDLAV 228
The following BLAST results are available for this feature:
BLAST of TCONS_00067823-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMM261.067e-2334.21Transmembrane protein 26 OS=Homo sapiens GN=TMEM26... [more]
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