TCONS_00067587-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067587-protein
Unique NameTCONS_00067587-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length162

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067587-protein ID=TCONS_00067587-protein|Name=TCONS_00067587-protein|organism=Clytia hemisphaerica|type=polypeptide|length=162bp
MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD
VGGQDKIRPLWRHYFTNTQGLIFVVDSNDRERIQEAAAELNKMVNEDELK
DSFILVFANKQDLPNALSTSELTEKLGLHQLRGRKWYVQAACATQGNGLY
EGLDWLSNELSK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042203XLOC_042203Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067587TCONS_00067587Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR005225Small_GTP-bd_dom
IPR024156Small_GTPase_ARF
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007264 small GTPase mediated signal transduction
cellular_component GO:0005622 intracellular
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..100
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..162
e-value: 3.8E-106
score: 368.6
NoneNo IPR availableSMARTSM00178sar_sub_1coord: 1..160
e-value: 1.6E-21
score: 87.5
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..152
e-value: 0.0055
score: -72.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1..162
e-value: 1.7E-46
score: 157.3
NoneNo IPR availableCDDcd04150Arf1_5_likecoord: 1..159
e-value: 2.7942E-115
score: 325.131
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 2..25
score: 52.45
coord: 30..54
score: 33.65
coord: 57..82
score: 35.07
coord: 102..123
score: 40.11
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 1..159
e-value: 1.0E-74
score: 249.7
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 1..126
e-value: 2.1E-24
score: 84.1
IPR024156Small GTPase superfamily, ARF typePROSITEPS51417ARFcoord: 1..160
score: 23.581
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..160

Blast
[Close]
BLAST of TCONS_00067587-protein vs. Swiss-Prot (Human)
Match: ARF5 (ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 PE=1 SV=2)

HSP 1 Score: 293.893 bits (751), Expect = 1.907e-103
Identity = 137/162 (84.57%), Postives = 148/162 (91.36%), Query Frame = 0 
Query:    1 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFTNTQGLIFVVDSNDRERIQEAAAELNKMVNEDELKDSFILVFANKQDLPNALSTSELTEKLGLHQLRGRKWYVQAACATQGNGLYEGLDWLSNELSK 162
            MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYF NTQGLIFVVDSNDRER+QE+A EL KM+ EDEL+D+ +LVFANKQD+PNA+  SELT+KLGL  LR R WYVQA CATQG GLY+GLDWLS+ELSK
Sbjct:   18 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSK 179
The following BLAST results are available for this feature:
BLAST of TCONS_00067587-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARF51.907e-10384.57ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 ... [more]
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