TCONS_00067497-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067497-protein
Unique NameTCONS_00067497-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length322

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067497-protein ID=TCONS_00067497-protein|Name=TCONS_00067497-protein|organism=Clytia hemisphaerica|type=polypeptide|length=322bp
MSDCRNSSQVHLFAGGCGGTVAAIVTCPLEVLKTRLQSSGAVFHPVASGH
AHLNVATSAGNLSTTGIGYLSSRPTGIIGCLRHMVKTEGFRSLYKGLGPN
IIGVAPARAIYFAVYAKSSRFIIRSGTDKDSPLVHMCAGASAGFITHTFT
APIWFIKTRLQLNAQTRSTMKRVIRDVYQREGIKGFYRGLSASYFGIIET
IIHFVIYERLKRLLREYHKEHSADHADKNNVTDFMLAAGFSKSVASMCAY
PHEVIRTRLRQEEHSGPRKYRSFFQTLFLVYKEEGRIGLYGGLGTQLVRQ
VPNSAVMFMVYEAIMFTICSND
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042150XLOC_042150Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067497TCONS_00067497Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002067Mit_carrier
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002067Mitochondrial carrier proteinPRINTSPR00926MITOCARRIERcoord: 11..24
score: 25.88
coord: 24..38
score: 31.37
coord: 187..205
score: 32.53
coord: 145..163
score: 27.44
coord: 238..260
score: 26.66
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 8..124
e-value: 4.0E-25
score: 87.5
coord: 233..315
e-value: 4.8E-18
score: 64.8
coord: 130..217
e-value: 1.9E-22
score: 78.9
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 229..317
score: 21.312
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 6..121
score: 21.805
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 130..213
score: 21.269
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 2..318
e-value: 6.8E-82
score: 274.0
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 7..313
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 5.0

Blast
[Close]
BLAST of TCONS_00067497-protein vs. Swiss-Prot (Human)
Match: S2536 (Solute carrier family 25 member 36 OS=Homo sapiens GN=SLC25A36 PE=1 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 4.692e-97
Identity = 158/318 (49.69%), Postives = 211/318 (66.35%), Query Frame = 0 
Query:   10 VHLFAGGCGGTVAAIVTCPLEVLKTRLQSSGAVFHPVASGHAHLNVATSAGNLSTTGIGYLSSRPTGIIGCLRHMVKTEGFRSLYKGLGPNIIGVAPARAIYFAVYAKSSRFIIRSGTDKDSPLVHMCAGASAGFITHTFTAPIWFIKTRLQLNAQTRSTMK----RVIRDVYQREGIKGFYRGLSASYFGIIETIIHFVIYERLKRLLREYHKEHSADHADKN--NVTDF---MLAAGFSKSVASMCAYPHEVIRTRLRQEEHSGPRKYRSFFQTLFLVYKEEGRIGLYGGLGTQLVRQVPNSAVMFMVYEAIMFTI 318
            VHLFAGGCGGTV AI+TCPLEV+KTRLQSS    +      + + + T AG      +  + S   G + CL+ +++ EG RSL++GLGPN++GVAP+RAIYFA Y+ + +  +    D DS  VHM + A AGF   T T PIW IKTRLQL+A+ R   +      +R VYQ +G+KGFYRG+SASY GI ET+IHFVIYE +K+ L EY    + ++ +++    +DF   MLAA  SK+ A+  AYPHEV+RTRLR+E      KYRSFFQTL L+ +EEG   LY GL T LVRQ+PN+A+M   YE +++ +
Sbjct:    8 VHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYI-----SEVQLNTMAG----ASVNRVVS--PGPLHCLKVILEKEGPRSLFRGLGPNLVGVAPSRAIYFAAYS-NCKEKLNDVFDPDSTQVHMISAAMAGFTAITATNPIWLIKTRLQLDARNRGERRMGAFECVRKVYQTDGLKGFYRGMSASYAGISETVIHFVIYESIKQKLLEYKTASTMENDEESVKEASDFVGMMLAAATSKTCATTIAYPHEVVRTRLREE----GTKYRSFFQTLSLLVQEEGYGSLYRGLTTHLVRQIPNTAIMMATYELVVYLL 309
The following BLAST results are available for this feature:
BLAST of TCONS_00067497-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S25364.692e-9749.69Solute carrier family 25 member 36 OS=Homo sapiens... [more]
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