TCONS_00066514-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066514-protein
Unique NameTCONS_00066514-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1052

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066514-protein ID=TCONS_00066514-protein|Name=TCONS_00066514-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1052bp
MDIKGILVAKSYREDQWMAGTITDVDDDSLEVTWCHGKIEKFPKTTSQLY
VYDIGPAGVQHVGIVCDGCRTKGLVDYRWKCTVCHDFDLCSFCYHGNTHN
TEHVFQRIDIPGAKPVQVRKRGGEKQARLNGFFQGAKVKRGKDWEWGNQD
GGIGTMGTVLGSYDWTGAFETSAVRSGVTISWEKSKLKANYRIGFNGKVD
LICENPAFGGQFYSSHLANTKTLLEHKRSSSQGKQFNTGDAVVMCKKIET
LVSAQEGSGGFIKEMTKCIGVVGRVVQTIDKGVFVQFGISERPDDVLALL
LNVNVKKQKHWLLNRDILQKVAEFQPGDTAKVINDKDTFIVMQTNIGNYH
PSQDVLVGEEVKIIRNDGEKLQIEYGNNKVFMSCGAVSKCEDQADRLLGL
LLEGFLRSRLDEKEKEKEEEEKRKRVEEQNRAAAAAAAREEQKPVIKKPQ
AKKERSLRELVEKGDDSSVAKYLEERPYMINQFENGSTSLHVAVFNNDSE
IVDIFLKKHADLSVADDNGDTVLHIAASKNLIGIGRKLVRSQCAVNKKNK
SEMTALSVATHKGYVDFVRMLVFEKCDTDQPDYEGNIPLHVACKVGNKNL
VRILLENKKDLLVPNRLGLFAIHIALDVENKEIIEMILDKSPEALNSTQP
DGSTPLHFVVRRGKAPMVEYIVHLITKYRYNIDSRTKQGQTALHLACMEG
FLAIVKLLLQHGADINAEMNDGNTSVLMCVLKHRMLFNLPPQLQGNELIR
PDLRTVKSHFENTNANGIITACFLLENGANLNHFNHAGKSALDVCEDSEL
TKLLCEFGKKHRSLQEPSSSAKAPPIPARRSSEKKSTKPKIQKQESELDF
DPCPLCQKRTPVEGRFQPCKHALFCYQHAETFQKCPQCFSEVTHLSRLSV
ERLPNCKFCAEKQINITFKPCGHQIACFECSKPFRVCITCEQRIEAKVPI
VDGSPKPKPKPRPAPRKPRPNSTTGSTPSSTAQSSASAQGAAAGGASIPE
EDENQLCIICFERPRNNVFQCGHTCCKVCSYAIDECHICRQTIKQRIFIY
DN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041614XLOC_041614Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066514TCONS_00066514Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR001841Znf_RING
IPR000433Znf_ZZ
IPR013083Znf_RING/FYVE/PHD
IPR020683Ankyrin_rpt-contain_dom
IPR010606Mib_Herc2
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0046872metal ion binding
GO:0004842ubiquitin-protein transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 403..443
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 905..945
e-value: 1.8E-7
score: 30.8
coord: 1004..1045
e-value: 2.7E-8
score: 33.4
NoneNo IPR availableGENE3D1.10.1170.10coord: 971..1052
e-value: 6.1E-12
score: 45.5
coord: 899..952
e-value: 4.8E-7
score: 29.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 951..997
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 815..846
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 412..460
NoneNo IPR availableCDDcd00204ANKcoord: 484..605
e-value: 1.61225E-29
score: 114.403
NoneNo IPR availableCDDcd00204ANKcoord: 683..808
e-value: 2.37455E-13
score: 67.4086
NoneNo IPR availableCDDcd00204ANKcoord: 579..709
e-value: 4.37816E-30
score: 115.944
NoneNo IPR availableSUPERFAMILY159034Mib/herc2 domain-likecoord: 129..205
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 44..120
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 704..718
score: 49.0
coord: 486..501
score: 37.11
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 617..647
e-value: 660.0
score: 6.4
coord: 651..684
e-value: 12.0
score: 14.9
coord: 518..547
e-value: 89.0
score: 11.9
coord: 551..580
e-value: 46.0
score: 12.9
coord: 688..717
e-value: 2.2E-8
score: 43.9
coord: 485..514
e-value: 0.003
score: 26.8
coord: 584..613
e-value: 4.5E-4
score: 29.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 485..517
score: 12.369
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 584..616
score: 11.354
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 651..687
score: 9.244
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 688..720
score: 14.746
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 906..940
e-value: 0.9
score: 11.6
coord: 853..888
e-value: 0.39
score: 14.8
coord: 1007..1039
e-value: 0.32
score: 15.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 1007..1040
score: 9.937
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 1007..1043
e-value: 0.00242316
score: 36.2696
IPR000433Zinc finger, ZZ-typeSMARTSM00291zz_5coord: 60..105
e-value: 1.0E-7
score: 41.7
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 63..100
e-value: 5.6E-8
score: 32.4
IPR000433Zinc finger, ZZ-typePROSITEPS01357ZF_ZZ_1coord: 66..93
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 60..107
score: 12.658
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 827..898
e-value: 0.0077
score: 15.2
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 601..813
e-value: 2.5E-41
score: 140.9
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 490..579
e-value: 1.9E-11
score: 44.3
coord: 623..717
e-value: 1.3E-13
score: 51.2
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 391..600
e-value: 8.1E-37
score: 126.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 485..726
score: 60.509
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 477..808
IPR010606Mib-herc2PFAMPF06701MIB_HERC2coord: 135..203
e-value: 1.6E-17
score: 63.4
IPR010606Mib-herc2PROSITEPS51416MIB_HERC2coord: 124..207
score: 20.416

Blast
[Close]
BLAST of TCONS_00066514-protein vs. Swiss-Prot (Human)
Match: MIB1 (E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens GN=MIB1 PE=1 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 5.253e-114
Identity = 295/1050 (28.10%), Postives = 461/1050 (43.90%), Query Frame = 0 
Query:   32 VTWCHGKIEKFPKTTS-QLYVYDIGPAGVQHVGIVCDGCRTKGLVDYRWKCTVCHDFDLCSFCYHGNTHNTEHVFQRIDIPGAKPVQVRKRGGEKQARLNGFFQGAKVKRGKDWEWGNQDGGIGTMGTVLGSYDWTGAFETSAVRSGVTISWEKSKLKANYRIGFNGKVDLICENPAFGGQFYSSHLANTKTLLEHKRSSSQGKQFNTGDAVVMCKKIETLVSAQEGSGGFIKEMTKCIGVVGRVVQTI-DKGVFVQFGISERPDDVLALLLNVNVKKQKHWLLNRDILQKVAEFQPGDTAKVINDKDTFIVMQTNIGNYHPSQDVLVGE--EVKIIRNDGEKLQIEYGNNKVFMSCGAVSKCEDQADRLLGLLLEGFLRSRLDEKEKEKEEEEKRKRVEEQNRAAAAAAAREEQKPVIKKPQAKKERSLRELVEKGDDSSVAKYLEERPYMINQFENGSTSLHVAVFNNDSEIVDIFLKKHADLSVADDNGDTVLHIAASKNLIGIGRKLVRSQCAVNKKNKSEMTALSVATHKGYVDFVRMLVFEKCDTDQPDYEGNIPLHVACKVGNKNLVRILLENKKDLLVPNRLGLFAIHIALDVENKEIIEMILDKSPEA--LNSTQPDGSTPLHFVVRRGKAPMVEYIVHLITKYRYNIDSRTKQGQTALHLACMEGFLAIVKLLLQHGADINAEMNDGNTSVLMCVLKHRMLFNLPPQLQGNELIRPDLRTVKSHFE---NTNANGIIT-----------ACFLLENGANLNHFNHAGKSALDVCEDSELTKLLCEFGKKHRSLQEPSSSAKAPPIPARRSSEKKSTKPKIQKQESELDFDPCPLCQ--KRTPVEGRFQPCKHALFCYQHAETFQKCPQCFSEVTHLSRLSVERLPNCKFCAEKQINITFKPCGHQIACFECSKPFRVCITCEQRIEAKVPIV---------DGSPKPKPKPRPAPRKPRPNSTTGSTPSSTAQSSASAQGAAAGGASIPEEDENQLCIICFERPRNNVFQCGHTCCKVCSYAIDECHICRQTIKQRIFIY 1050
            V W +G    +  + +  L + D  P G++H G +CD CR + ++  RWKC  C ++DLC+ CYHG+ H+  H F RI  PG++ V +  R   K+    G F GA+V RG DW+W +QDGG G  G V    DW+     S+  S   + W+    K  YR+GF G  DL C   A GG FY  H      +L  +  +        GD V +   +E + S Q G GG+   M + +   G V     D  + VQ+    R     A+L   N+ +        +     ++FQ GD  +V  D +   ++Q   G +  +    +G+   V+ I +D + L++E        +  AVSK         G  +      RL +  K+  E ++   + E+   AAA                            GD + V   L+     +N    G T++  A  N   +I+ + LK++ D+   D +GD  +H AA  +   +   L R    +N +NK   T L +A +KG++  V+ L+   C     D EG+ PLH A      +++ +LLE   D+ + N  G  A+H A    N   + ++L K P    ++  + DG T LH         + E +VH   +   N+D +    QTALHLA       IV+LL++ GA ++ +  DG+T  L   L+H  L  L  QLQ  +    D+  V + +E   NT   G+ T           ACFL  NGA+L+  N  G+S LD+C D  L K L +  K+  S Q  S S                  P +   +SE   + C +C   KR  +   F PC H   C   +   +KC  C  +V   SR  +E    C  C++K+  + F+PCGH  AC  C+   + C+ C   +E +VP +         D +        P  +K + N+   +      Q              + +  E  +C +C +R +N +F CGH  C++C   + EC ICR+ I++RI +Y
Sbjct:   50 VVWDNGTAANYRCSGAYDLRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHLRHRFYRITTPGSERVLLESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTEIQDWS----ASSPHSAAYVLWDNGA-KNLYRVGFEGMSDLKCVQDAKGGSFYRDHCP----VLGEQNGNRNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPSGNRWTFNPAVLTKANIVRSGDAAQGAE--GGTSQFQVGDLVQVCYDLERIKLLQRGHGEWAEAMLPTLGKVGRVQQIYSDSD-LKVEVCGTSWTYNPAAVSKVASA-----GSAISNASGERLSQLLKKLFETQESGDLNEELVKAAA---------------------------NGDVAKVEDLLKRPDVDVNGQCAGHTAMQAASQNGHVDILKLLLKQNVDVEAEDKDGDRAVHHAAFGDEGAVIEVLHRGSADLNARNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDILAVLLEAGADVTITNNNGFNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVH---QGNANLDIQNVNQQTALHLAVERQHTQIVRLLVRAGAKLDIQDKDGDTP-LHEALRHHTLSQLR-QLQDMQ----DVGKVDAAWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLSIRNKKGQSPLDLCPDPNLCKALAKCHKEKVSGQVGSRS------------------PSMISNDSET-LEECMVCSDMKRDTL---FGPCGHIATCSLCSPRVKKCLICKEQVQ--SRTKIEE---CVVCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAVVERRVPFIMCCGGKSSEDATDDISSGNIPVLQKDKDNTNVNADVQKLQQQ-------------LQDIKEQTMCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY 1006
The following BLAST results are available for this feature:
BLAST of TCONS_00066514-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MIB15.253e-11428.10E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens G... [more]
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