TCONS_00066453-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066453-protein
Unique NameTCONS_00066453-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length393

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066453-protein ID=TCONS_00066453-protein|Name=TCONS_00066453-protein|organism=Clytia hemisphaerica|type=polypeptide|length=393bp
MAALHRRALDNLRSENATLKQGQVKATKNTLNRPALANISNIQRRPALGT
KKKDEHKEITKGLTRHKASTHLTATEKKDVFIFQDDSEEETKQFENDQIA
KLTEQMAEIDVEDIDADDLTNPSLCAEYVKDIYKYMHVLEKKLQPKDYMS
RQTNINKKMRSILVDWLIQVQSRFRLLQETLYLTIYTIDRFLAKCDVSRS
ELQLVGVTAMLIASKYEEMYAPEIGDFVYITDNAYSKVKIRAMEQKMLKA
CEFDFSNPLALHFLRRNSKAGAVDATKHTMAKYLMELTLVDYDMATLLPS
QIAAAASYLSTQLLDKEKAEWTPTLAHYSTYSEAAIFPIVCQMAKLVLTM
NMEGSKYQAVKSKYAESKFMKISRYPVLVGPYMRELADQVDNA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041572XLOC_041572Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066453TCONS_00066453Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR004367Cyclin_C-dom
IPR006671Cyclin_N
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 92..112
NoneNo IPR availablePIRSFPIRSF001771Cyclin_A_B_D_Ecoord: 3..386
e-value: 1.2E-119
score: 397.8
NoneNo IPR availableCDDcd00043CYCLINcoord: 159..248
e-value: 8.06645E-21
score: 84.5976
NoneNo IPR availableCDDcd00043CYCLINcoord: 258..348
e-value: 3.27808E-12
score: 61.1004
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 262..345
e-value: 1.2E-15
score: 68.0
coord: 165..249
e-value: 5.2E-24
score: 95.8
IPR013763Cyclin-likeGENE3D1.10.472.10coord: 250..393
e-value: 3.6E-29
score: 101.1
IPR013763Cyclin-likeGENE3D1.10.472.10coord: 144..249
e-value: 4.8E-31
score: 106.5
IPR013763Cyclin-likeSUPERFAMILY47954Cyclin-likecoord: 258..377
IPR013763Cyclin-likeSUPERFAMILY47954Cyclin-likecoord: 120..255
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 258..378
e-value: 3.3E-32
score: 123.0
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 258..375
e-value: 2.7E-32
score: 111.3
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 131..255
e-value: 3.4E-41
score: 139.9

Blast
[Close]
BLAST of TCONS_00066453-protein vs. Swiss-Prot (Human)
Match: CCNB1 (G2/mitotic-specific cyclin-B1 OS=Homo sapiens GN=CCNB1 PE=1 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 1.424e-101
Identity = 151/282 (53.55%), Postives = 200/282 (70.92%), Query Frame = 0 
Query:  111 VEDIDADDLTNPSLCAEYVKDIYKYMHVLEKK--LQPKDYMSRQTNINKKMRSILVDWLIQVQSRFRLLQETLYLTIYTIDRFLAKCDVSRSELQLVGVTAMLIASKYEEMYAPEIGDFVYITDNAYSKVKIRAMEQKMLKACEFDFSNPLALHFLRRNSKAGAVDATKHTMAKYLMELTLVDYDMATLLPSQIAAAASYLSTQLLDKEKAEWTPTLAHYSTYSEAAIFPIVCQMAKLVLTMNMEGSKYQAVKSKYAESKFMKISRYPVLVGPYMRELADQV 390
            V D+DA+D  +P+LC+EYVKDIY Y+  LE++  ++PK  + R+   N  MR+IL+DWL+QVQ +FRLLQET+Y+T+  IDRF+    V +  LQLVGVTAM IASKYEEMY PEIGDF ++TDN Y+K +IR ME K+L+A  F    PL LHFLRR SK G VD  +HT+AKYLMELT++DYDM    PSQIAA A  L+ ++LD    EWTPTL HY +Y+E ++ P++  +AK V+ +N   +K+  VK+KYA SK  KIS  P L    +++LA  V
Sbjct:  153 VNDVDAEDGADPNLCSEYVKDIYAYLRQLEEEQAVRPKYLLGREVTGN--MRAILIDWLVQVQMKFRLLQETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTKHQIRQMEMKILRALNFGLGRPLPLHFLRRASKIGEVDVEQHTLAKYLMELTMLDYDMVHFPPSQIAAGAFCLALKILD--NGEWTPTLQHYLSYTEESLLPVMQHLAKNVVMVNQGLTKHMTVKNKYATSKHAKISTLPQLNSALVQDLAKAV 430
The following BLAST results are available for this feature:
BLAST of TCONS_00066453-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCNB11.424e-10153.55G2/mitotic-specific cyclin-B1 OS=Homo sapiens GN=C... [more]
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