TCONS_00066162-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066162-protein
Unique NameTCONS_00066162-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length209

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066162-protein ID=TCONS_00066162-protein|Name=TCONS_00066162-protein|organism=Clytia hemisphaerica|type=polypeptide|length=209bp
MTLPTALQARLKKRGLVVKEQNPEGGEQSGGQQARKSYRQQPLPPGWFKV
PDPETNRDYFWNVHTNQVSWRHPNDPRADITYPACWQNAEEKDKTDALRH
SEETRTLKSKVKVGKHPSLLKAQKQREKNAPYRKGKKDDDTLDPMDPASY
SDVARGSWSSGLREDADVKTGVDTTANGPLFQQRPYPSPGDILRRNRQPK
NNEDDDDEN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041413XLOC_041413Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066162TCONS_00066162Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 42..75
e-value: 2.2E-5
score: 33.9
IPR001202WW domainPFAMPF00397WWcoord: 43..73
e-value: 3.4E-7
score: 30.1
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 41..75
score: 13.398
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 38..76
NoneNo IPR availableGENE3D2.20.70.10coord: 33..74
e-value: 1.1E-7
score: 30.9
NoneNo IPR availableGENE3D3.40.30.10coord: 78..206
e-value: 0.0013
score: 18.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54
NoneNo IPR availableCDDcd00201WWcoord: 44..75
e-value: 0.00146755
score: 33.6554

Blast
[Close]
BLAST of TCONS_00066162-protein vs. Swiss-Prot (Human)
Match: PQBP1 (Polyglutamine-binding protein 1 OS=Homo sapiens GN=PQBP1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.098e-23
Identity = 48/76 (63.16%), Postives = 57/76 (75.00%), Query Frame = 0 
Query:  125 QREKNAPYRKGKK----DDDTLDPMDPASYSDVARGSWSSGLREDADVKTGVDTTANGPLFQQRPYPSPGDILRRN 196
            +RE+ APY K KK     D+ LDPMDP+SYSD  RG+WS+GL +  + KTG DTTA GPLFQQRPYPSPG +LR N
Sbjct:  180 RREELAPYPKSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSPGAVLRAN 255
The following BLAST results are available for this feature:
BLAST of TCONS_00066162-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PQBP12.098e-2363.16Polyglutamine-binding protein 1 OS=Homo sapiens GN... [more]
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