TCONS_00065934-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065934-protein
Unique NameTCONS_00065934-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length437

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065934-protein ID=TCONS_00065934-protein|Name=TCONS_00065934-protein|organism=Clytia hemisphaerica|type=polypeptide|length=437bp
MIQTKLKTEMYILQNRMTQTLYKKQVKILVSSLGNLSXADTLQKASQDIS
FYTWKPFNATQVLIVYWRQLRSDFNEKTLKFQGVLASDGEETYLIHLNEK
YLGEKVVQSGVSAKRCFWNWFGGKEWVGGMRSNTGYNGQNIYKVSNKKCF
KDYLIPFGEGIDTGDMGEADEVIKNFDLNQKFPFFSYEDMYIKVNTNNAL
TKKADIYSFYGPNVFNKMSRSFISLFYNDMFTEFGGHMTWRETKTETDLS
SINNYIKKRNPSLTFIPKHAIILTLVNVQQYGVRSSRNTMQQILVTDGSL
TFAILNVYQADSVHMSASGYYDENCKKAKVFHSHTEKDFEEHLDEINPIV
VKLINKDCTFPEDDTIGVFIPTTTTTSTTTTSTTTTTTPTTTTTTTQSLS
QSSDTQGTDYTVIIGSGVGGGVFLILIVIIACVCKRR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041308XLOC_041308Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065934TCONS_00065934Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003886NIDO_dom
Vocabulary: Biological Process
TermDefinition
GO:0007160cell-matrix adhesion
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007160 cell-matrix adhesion
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003886NIDO domainSMARTSM00539ylk_9coord: 225..346
e-value: 0.0047
score: 2.0
NoneNo IPR availableGENE3D1.20.5.100coord: 398..437
e-value: 2.1E-6
score: 26.8

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065934-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top