TCONS_00065893-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065893-protein
Unique NameTCONS_00065893-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length804

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065893-protein ID=TCONS_00065893-protein|Name=TCONS_00065893-protein|organism=Clytia hemisphaerica|type=polypeptide|length=804bp
MSNRSPTAKYRVTLLCAKNVAKHDFFRLPDPFARIKVDGSGQCHTTKSLK
STVDPEWKEHYDLLLAKNESFTISVWNQRKVHKGKGAGFLGCVKVTPHAI
DRLKGQGYQRMNLQAVNNEESDSHISGHIIVSIVAKENAETFWYSPFQQP
MDVDGTTLPPGWEERRTPAGRVQYVNKMTRAVQWDKPTRSAYDVNSEGRS
NVEIPTATIGGVISEASPEQPHRQRLITTKSDNGRLSSSFVLKGVKDQER
HRSTKSKSGHSKKVAIDKDSKVNTAAPNSNEASNSINTSSPQGATAADRP
LVDRQKYYMNRNLIHRVAADNFDRKTTTQGQVYFVNRITGQTTWNDPSLS
DLASGVIDLGPLPDGWEVRTTPSGKSYFVDHNTRTTQFADPRLTQSQSPR
ELKPRKQEKTERVEELPLYKRDLVYKLKSFREDLHALQPAHGHCCIEVRR
NSVFRDSFQQVRQLKSKDLRKRLMIKFKSEIGLDYGGIAREWLYLLSQEM
FNPQYGLFKNSKDAQYTLEINPDSGVNPEHLSFFHFVGRVVGLAVFHGHY
LDGGFTLPFYKQLLGKRLTIADLESVDPQLFQGLSWLLENNVSSMDFSPP
TFAVEHQSFGQTTKHNLKEDGEAIQVTDDNKKEYVQLYVNYRLLYGIEKQ
FKAFVKGFTELVPLHLIKMFDEREMELMICGLGKIDLKDWKNYTNLKHCT
KDHNIVLWFWEVVEKYDEEQRARLLQFVTGSSRIPIQGFKALQGAAGQNG
PRLFTINVTKMDPNGLPKAHTCFNKLDIPNYESKEILYEKLTWAVEETCG
FNIE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041290XLOC_041290Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065893TCONS_00065893Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR001202WW_dom
IPR000569HECT_dom
IPR024928E3_ub_ligase_SMURF1
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0004842ubiquitin-protein transferase activity
GO:0061630ubiquitin protein ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
molecular_function GO:0005515 protein binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 9..112
e-value: 2.4E-9
score: 47.1
IPR000008C2 domainPFAMPF00168C2coord: 10..98
e-value: 1.1E-10
score: 41.7
IPR000008C2 domainGENE3D2.60.40.150coord: 5..121
e-value: 3.3E-17
score: 62.3
IPR000008C2 domainPROSITEPS50004C2coord: 1..94
score: 10.471
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 8..133
IPR001202WW domainSMARTSM00456ww_5coord: 157..189
e-value: 1.4E-8
score: 44.5
coord: 361..393
e-value: 1.5E-12
score: 57.7
coord: 317..349
e-value: 0.44
score: 19.6
IPR001202WW domainPFAMPF00397WWcoord: 158..187
e-value: 1.2E-10
score: 41.2
coord: 362..390
e-value: 7.8E-9
score: 35.4
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 366..391
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 316..349
score: 9.418
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 360..393
score: 16.097
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 156..189
score: 14.816
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 156..188
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 359..395
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 323..349
IPR000569HECT domainSMARTSM00119hect_3coord: 463..804
e-value: 9.0E-147
score: 503.6
IPR000569HECT domainPFAMPF00632HECTcoord: 494..803
e-value: 9.8E-99
score: 330.6
IPR000569HECT domainPROSITEPS50237HECTcoord: 465..804
score: 108.433
IPR000569HECT domainCDDcd00078HECTccoord: 444..801
e-value: 1.20496E-158
score: 467.427
IPR000569HECT domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 435..797
NoneNo IPR availableGENE3D2.20.70.10coord: 172..193
e-value: 2.9E-5
score: 23.1
coord: 324..354
e-value: 2.8E-8
score: 32.7
NoneNo IPR availableGENE3D2.20.70.10coord: 356..411
e-value: 3.2E-14
score: 51.9
NoneNo IPR availableGENE3D2.20.70.10coord: 122..171
e-value: 5.4E-9
score: 35.4
NoneNo IPR availableGENE3D3.30.2410.10coord: 683..804
e-value: 2.0E-42
score: 143.6
NoneNo IPR availableGENE3D3.90.1750.10coord: 420..599
e-value: 4.3E-57
score: 191.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..410
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..300
NoneNo IPR availableCDDcd00201WWcoord: 326..347
e-value: 4.70102E-4
score: 37.8926
NoneNo IPR availableCDDcd00201WWcoord: 159..188
e-value: 3.35593E-8
score: 49.8338
NoneNo IPR availableCDDcd00201WWcoord: 363..393
e-value: 1.07424E-9
score: 54.071
IPR024928E3 ubiquitin-protein ligase, SMURF1 typePIRSFPIRSF001569E3_ub_ligase_SMURF1coord: 193..354
e-value: 0.0012
score: 15.2
coord: 243..804
e-value: 2.6E-185
score: 616.1
coord: 102..215
e-value: 1.1E-7
score: 28.5
coord: 1..145
e-value: 2.8E-16
score: 57.0

Blast
[Close]
BLAST of TCONS_00065893-protein vs. Swiss-Prot (Human)
Match: SMUF2 (E3 ubiquitin-protein ligase SMURF2 OS=Homo sapiens GN=SMURF2 PE=1 SV=1)

HSP 1 Score: 723.391 bits (1866), Expect = 0.000e+0
Identity = 385/811 (47.47%), Postives = 517/811 (63.75%), Query Frame = 0 
Query:    1 MSN----RSPTAKYRVTLLCAKNVAKHDFFRLPDPFARIKVDGSGQCHTTKSLKSTVDPEWKEHYDLLLAKNESFTISVWNQRKVHKGKGAGFLGCVKVTPHAIDRLKGQGYQRMNLQAVNNEESDSHISGHIIVSIVAKENAETFWYSPFQQPMDVD---GTTLPPGWEERRTPAGRVQYVNKMTRAVQWDKPTRSAYDVNSEGRSNVEIPTATIGGVISEASPEQPHRQRLITTKSDNGRLSSSFVLKGVKDQERHRSTKSKSGHSKKVAIDKDSKVNTAAPNSNEASNSINTSSPQGATAADRPLVDRQKYYMNRNLIHRVAADNFDRKTTTQGQVYFVNRITGQTTWNDPSLSDLASGVIDLGPLPDGWEVRTTPSGKSYFVDHNTRTTQFADPRLTQSQSPRELKPRKQEKTERVEELPLYKRDLVYKLKSFREDLHALQPAHGHCCIEVRRNSVFRDSFQQVRQLKSKDLRKRLMIKFKSEIGLDYGGIAREWLYLLSQEMFNPQYGLFKNSKDAQYTLEINPDSGVNPEHLSFFHFVGRVVGLAVFHGHYLDGGFTLPFYKQLLGKRLTIADLESVDPQLFQGLSWLLENNVSSMDFSPPTFAVEHQSFGQTTKHNLKEDGEAIQVTDDNKKEYVQLYVNYRLLYGIEKQFKAFVKGFTELVPLHLIKMFDEREMELMICGLGKIDLKDWKNYTNLKHCTKDHNIVLWFWEVVEKYDEEQRARLLQFVTGSSRIPIQGFKALQGAAGQNGPRLFTINVTKMDPNGLPKAHTCFNKLDIPNYESKEILYEKLTWAVEETCGFNIE 804
            MSN    R+   K R+T+LCAKN+ K DFFRLPDPFA++ VDGSGQCH+T ++K+T+DP+W +HYDL + K++S TISVWN +K+HK +GAGFLGCV++  +AI+RLK  GYQR++L  +   ++D+ + G I+VS+ +++   T       Q +D        LP GWEERRT +GR+QY+N +TR  QW++PTR A + +S GR         +   + E +P         T  +  G+ S   + +     +RHR+  S++       + +  +  T      +        +  G +    P V R    +N   +  +    ++ + T  G+VYFV+     T + DP L                       S   + V +     +    +   S  P        + TE +  +P YKRDLV KLK  R++L   QP  GHC IEV R  +F +S++QV +++ KDL KRLMIKF+ E GLDYGG+AREWLYLLS EM NP YGLF+ S+D  YTL+INPDS VNPEHLS+FHFVGR++G+AVFHGHY+DGGFTLPFYKQLLGK +T+ D+E VDP L   L W+LEN+++ +     TF VEH ++G+  +H LK +G++I V ++NKKEYV+LYVN+R L GIE QF A  KGF E++P HL+K FDE+E+EL+ICGLGKID+ DWK  T LKHCT D NIV WFW+ VE +DEE+RARLLQFVTGSSR+P+QGFKALQGAA   GPRLFTI+      N LPKAHTCFN++DIP YES E LYEKL  A+EETCGF +E
Sbjct:    1 MSNPGGRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPKWNQHYDLYIGKSDSVTISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLCKLGPNDNDT-VRGQIVVSLQSRDRIGT-----GGQVVDCSRLFDNDLPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEYSSPGRP--------LSCFVDENTPISG------TNGATCGQSSDPRLAERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTT-----QQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPP-GWEIRNTATGRVYFVDHNNRTTQFTDPRL-----------------------SANLHLVLNRQNQLKDQQQQQVVSLCP--------DDTECL-TVPRYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKSITLDDMELVDPDLHNSLVWILENDITGV--LDHTFCVEHNAYGEIIQHELKPNGKSIPVNEENKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKELELIICGLGKIDVNDWKVNTRLKHCTPDSNIVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAA---GPRLFTIHQIDACTNNLPKAHTCFNRIDIPPYESYEKLYEKLLTAIEETCGFAVE 748
The following BLAST results are available for this feature:
BLAST of TCONS_00065893-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SMUF20.000e+047.47E3 ubiquitin-protein ligase SMURF2 OS=Homo sapiens... [more]
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