TCONS_00065861-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065861-protein
Unique NameTCONS_00065861-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length304

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065861-protein ID=TCONS_00065861-protein|Name=TCONS_00065861-protein|organism=Clytia hemisphaerica|type=polypeptide|length=304bp
QNPYFHFRFAGKMVDPHQENLQRLCRICGENILNDGVLVDSKSEDILECF
YLKTRKDEDRKHPKYICLKCCAQLNAIKKRGSTVKHQVINWPLHSDDGCW
VCSRADTSRNSPGRPKKTKKQGGRPSKSPVPTIWTRNNILALIQQIPDSL
KETDNNDIPLTSFLQDDFTDLVKCPVCQKLFDKPVLVSSCQHVVCLMCLL
SHIEGHGLEKCKCPCQSCTSLVSPSGVIFSQQTIDIINRLKPATSTTEIK
LKDVFSLTTGDKVPRDYEEAAVHIIKTKLSQSCDKSISFNTDGSRVDEGK
QNNI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041259XLOC_041259Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065861TCONS_00065861Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR001841Znf_RING
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 141..292
e-value: 2.0E-9
score: 36.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..130
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 166..241
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 190..199
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 174..214
score: 9.317
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 173..214
e-value: 1.60969E-4
score: 37.4252

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065861-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top