TCONS_00065842-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00065842-protein
Unique Name	TCONS_00065842-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1045

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00065842-protein ID=TCONS_00065842-protein|Name=TCONS_00065842-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1045bp
MERPRIKNKRILRERIEKFISPIYFADVNLHSKLYKHISAVPSILHFAAP
GRITHDDAISNLDVYNEVSVGTSFGPSWSTHWFKLDIDLSSCTEWIGHQL
RLRWNSNSEALVWQDGVPKQGLTGGDNSERWDYILTNNCCGKEKMTIFIE
MAANGLFGAGANSMIGPPDPNKSFTLSKLEIAVLDKDIYRIVQDLKILID
MAQTLPEENDLVDKALQVGCDVANCFQPEKSNSAEKALSILDFFFNGDAG
GTDRHQYKIHAMGHCHIDTAWLWPYAETKRKCARSWSSSIGLMKRYPEFT
FTCSQAVQLLWVEENYPELFKEIQVYTKKGQFLPTGGTWVEMDGNVPSGE
SFIRQFMYGQKFFKEHFGFYCDVFWLPDTFGYSAQLPQIAKSCAIKYFLT
QKISWSLINTFPHNSFVWQGIDGTKLLTHFPPADTYESNCSFKDIYKTSK
QNKDKGVVSEGVLLYGFGDGGGGPSEDMLENLSRLGSINGLPKIEHSTPT
KFFQSLEKVQKKLHTWVGELYLELHQGTFTTQAQIKKNNRQLEHFLYNVE
FLHVFASLQCLKEGTDSSFGANLHERIEECWKNILLNQFHDVLPGSSIKL
VNDDAIQIYKDTWVEAMKLTKELMKSLFGSSGDPGGEEIILNTLSFQRTE
LVEDEEKNLHFVCVPPHGYKTLTECVVQKHIPVTVSESDGSSFVLQNTHL
KATFNSCGQLTSCILLRNNREAVLPGQMCNQFLTYTDIPLYWDAWDIMPY
TNETGEVLSKFQNVETFNHGSLRAGIKFTLKISDKSEIRQTISLDAESKF
LRFETEVDWHENRKLLRVAFPMNVHTNQATYDIQCGHIQRTTSVNTSWDW
AKHEVCGHKWADLSEYGFGVSLLNDCKYGFTAYGSTLQMSLLRSPKAPDD
EVDMGTHSFSYAFMPHVGSFQSAQVNFTAHCFNNPLIWLQSGKKVNDLSS
LSLFTIDNHAVVIQAIKMHNNKEKNVILRLHESHGGNSDVLITSYHAFQD
VARVNSLEEVDETLSSVSNCVEKLNANNASVKVKPFEIITLSFQF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041243	XLOC_041243	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00065842	TCONS_00065842	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015341	Glyco_hydro_38_cen
IPR000602	Glyco_hydro_38_N
IPR011682	Glyco_hydro_38_C
IPR027291	Glyco_hydro_38/57_N
IPR011013	Gal_mutarotase_SF_dom
IPR011330	Glyco_hydro/deAcase_b/a-brl
IPR028995	Glyco_hydro_57/38_cen

Vocabulary: **Biological Process**
Term	Definition
GO:0006013	mannose metabolic process
GO:0005975	carbohydrate metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004559	alpha-mannosidase activity
GO:0030246	carbohydrate binding
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006013	mannose metabolic process
molecular_function	GO:0004559	alpha-mannosidase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0003824	catalytic activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015341	Glycoside hydrolase family 38, central domain	SMART	SM00872	Alpha_mann_mid_2	coord: 523..609 e-value: 1.0E-29 score: 114.8
IPR015341	Glycoside hydrolase family 38, central domain	GENE3D	1.20.1270.50		coord: 522..639 e-value: 5.2E-26 score: 90.5
IPR015341	Glycoside hydrolase family 38, central domain	PFAM	PF09261	Alpha-mann_mid	coord: 523..608 e-value: 6.2E-24 score: 84.1
IPR000602	Glycoside hydrolase family 38, N-terminal domain	PFAM	PF01074	Glyco_hydro_38	coord: 258..512 e-value: 2.6E-83 score: 279.6
IPR011682	Glycosyl hydrolase family 38, C-terminal	PFAM	PF07748	Glyco_hydro_38C	coord: 659..1041 e-value: 1.7E-66 score: 225.0
IPR027291	Glycoside hydrolase 38/57, N-terminal domain	GENE3D	3.20.110.10		coord: 207..462 e-value: 9.0E-88 score: 294.1
IPR011013	Galactose mutarotase-like domain	SUPERFAMILY	74650	Galactose mutarotase-like	coord: 637..1043
IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel	SUPERFAMILY	88713	Glycoside hydrolase/deacetylase	coord: 253..521
IPR028995	Glycoside hydrolase families 57/38, central domain	SUPERFAMILY	88688	Families 57/38 glycoside transferase middle domain	coord: 522..631

Blast

[Close]

BLAST of TCONS_00065842-protein vs. Swiss-Prot (Human)
Match: MA2C1 (Alpha-mannosidase 2C1 OS=Homo sapiens GN=MAN2C1 PE=1 SV=1)

HSP 1 Score: 823.157 bits (2125), Expect = 0.000e+0
Identity = 445/1026 (43.37%), Postives = 634/1026 (61.79%), Query Frame = 0

Query:    4 PRIKNKRILRERIEKFISPIYFADVNLHSKLYKHISAVPSILHFAAPGRITHDDAISNLDVYNEVSVGTSFGPSWSTHWFKLDIDLSSCTEWIGHQLRLRWNSNSEALVWQDGVPKQGLTGGDNSERWDYILTNNCCGKE--KMTIFIEMAANGLFGAGANSMIGPPDPNKSFTLSKLEIAVLDKDIYRIVQDLKILIDMAQTLPEENDLVDKALQVGCDVANCFQPEKSNSAEKALSILDFFFNGDAGGTDRHQYKIHAMGHCHIDTAWLWPYAETKRKCARSWSSSIGLMKRYPEFTFTCSQAVQLLWVEENYPELFKEIQVYTKKGQFLPTGGTWVEMDGNVPSGESFIRQFMYGQKFFKEHFGFYCDVFWLPDTFGYSAQLPQIAKSCAIKYFLTQKISWSLINTFPHNSFVWQGIDGTKLLTHFPPADTYESNCSFKDIYKTSKQNKDKGVVSEGVLLYGFGDGGGGPSEDMLENLSRLGSINGLPKIEHSTPTKFFQSLEKVQKKLHTWVGELYLELHQGTFTTQAQIKKNNRQLEHFLYNVEFLHVFA---SLQCLKEGTDSSFGANLHERIEECWKNILLNQFHDVLPGSSIKLVNDDAIQIYKDTWVEAMKLTKELMKSLFGSSGDPGGEE-IILNTLSFQRTELVEDEEK----NLHFVCVPPHGYKTLTECV-VQKHIP----VTVSESDGSSFVLQNTHLKATFNSCGQLTSCILLRNNREAVLPGQMCNQFLTYTDIPLYWDAWDIMPYTNETGE-VLSKFQNVETFNHGSLRAGIKFTLKISDKSEIRQTISLDAESKFLRFETEVDWHENRKLLRVAFPMNVHTNQATYDIQCGHIQRTTSVNTSWDWAKHEVCGHKWADLSEYGFGVSLLNDCKYGFTAYGSTLQMSLLRSPKAPDDEVDMGTHSFSYAFMPHVGSFQSAQVNFTAHCFNNPLIWLQSGKKVNDLSSLSLFTIDNHAVVIQAIKMHNN--KEKNVILRLHESHGGNSDVLITSYHAFQDVARVNSLEEVD 1011
            P +K+ R   ER+EKF+SP+YF D NL  +L+     V  +  F  P R+ + +A+     +    VG SFGP+W T WF++++ +     W+G ++ L W S+ E LVW+DG P QGLT     E+  Y+LT+    ++   +T+++E+A NGL GAG  SMI  PDP K F LS+ E+AV  +D++ ++ DL++L+ +A+ L ++N    +AL     + N   P +  +   A ++   FF G  GG  +H   IHA GHCHIDTAWLWP+ ET RKCARSW +++ LM+R PEF F CSQA QL WV+  YP L+  IQ +  +GQF+P GGTWVEMDGN+PSGE+ +RQF+ GQ FF + FG  C  FWLPDTFGYSAQLPQI   C I+ FLTQK+SW+L+N+FPH++F W+G+DG+++L HFPP D+Y    S +++ KT   N+DKG  +    L+GFGDGGGGP++ ML+ L RL + +GLP+++ S+P + F +LE   ++L TWVGEL+LELH GT+TT AQIKK NR+ E  L++VE L   A   S Q L                    + +LLNQFHDV+ GS I++V ++A+  Y+D  + +   T     +    +G+PG E  +I+NTL ++R E++   +     +L  V VP  GY  +     +Q  +P      V E+DG S  L N  ++   +  G+LTS +L+ + REA+  G + NQF+ + D+PLYWDAWD+M Y  ET + VL +   +     G LR    F L+IS  S + Q + LD    ++RF TEV WHE  K L+V FP  V ++QATY+IQ GH+QR T  NTSWDWA+ EV  H+W DLSE+GFG++LLNDCKYG +  GS L +SLLR+PKAPD   D G H F+YA MPH GSFQ A V   A+  N PL+           +S S F++ + AVV++ +K   +  + ++++LRL+E+HG + D  +      Q+    + LE  D
Sbjct:    5 PALKHWRTTLERVEKFVSPLYFTDCNLRGRLFGASCPVAVLSSFLTPERLPYQEAVQR--DFRPAQVGDSFGPTWWTCWFRVELTIPEA--WVGQEVHLCWESDGEGLVWRDGEPVQGLT--KEGEKTSYVLTDRLGERDPRSLTLYVEVACNGLLGAGKGSMIAAPDPEKMFQLSRAELAVFHRDVHMLLVDLELLLGIAKGLGKDNQRSFQALYTANQMVNVCDPAQPETFPVAQALASRFF-GQHGGESQH--TIHATGHCHIDTAWLWPFKETVRKCARSWVTALQLMERNPEFIFACSQAQQLEWVKSRYPGLYSRIQEFACRGQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQNFFLQEFGKMCSEFWLPDTFGYSAQLPQIMHGCGIRRFLTQKLSWNLVNSFPHHTFFWEGLDGSRVLVHFPPGDSYGMQGSVEEVLKTVANNRDKGRANHSAFLFGFGDGGGGPTQTMLDRLKRLSNTDGLPRVQLSSPRQLFSALESDSEQLCTWVGELFLELHNGTYTTHAQIKKGNRECERILHDVELLSSLALARSAQFLYPAAQLQHLW----------RLLLLNQFHDVVTGSCIQMVAEEAMCHYED--IRSHGNTLLSAAAAALCAGEPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGYAPVPPPTSLQPLLPQQPVFVVQETDG-SVTLDNGIIRVKLDPTGRLTSLVLVASGREAIAEGAVGNQFVLFDDVPLYWDAWDVMDYHLETRKPVLGQAGTLAVGTEGGLRGSAWFLLQISPNSRLSQEVVLDVGCPYVRFHTEVHWHEAHKFLKVEFPARVRSSQATYEIQFGHLQRPTHYNTSWDWARFEVWAHRWMDLSEHGFGLALLNDCKYGASVRGSILSLSLLRAPKAPDATADTGRHEFTYALMPHKGSFQDAGVIQAAYSLNFPLL-ALPAPSPAPATSWSAFSVSSPAVVLETVKQAESSPQRRSLVLRLYEAHGSHVDCWLHLSLPVQEAILCDLLERPD 1007

The following BLAST results are available for this feature:

BLAST of TCONS_00065842-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00065842-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MA2C1	0.000e+0	43.37	Alpha-mannosidase 2C1 OS=Homo sapiens GN=MAN2C1 PE...	[more]

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TCONS_00065842-protein (polypeptide) - C. hemisphaerica