TCONS_00065832-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00065832-protein
Unique Name	TCONS_00065832-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	534

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00065832-protein ID=TCONS_00065832-protein|Name=TCONS_00065832-protein|organism=Clytia hemisphaerica|type=polypeptide|length=534bp
MSEAASPVRSSNIPESVALINLPNNQPQEPDDNDSGLDTGYDERITHRSI
GGPNHLNVVHRTPAFVKNCCPPRGRFGEYATRIIACIVIWAALYCVVGSS
AWVGGNLFSLYLLLVLASLGGFLVAWKTQYFNFPALLGMLIVGFLLKNIE
AINIAKNIDSNWSSSLRQVALAVILLRSGLGLDIAALKRLRFTVLRLAFG
PCITEAVTVAVMAHFLLGLPWLWAFQLGFIIGAVSPAVVVPSMLTLQLDG
YGVEEGIPTLVMAASSCDDVLAISLFGVFLGVSFSEGNLLWNIFRGPLEI
AMGIIGGLLIGSLLWYFPWKKAGNATANRSVLLLAFAFLFLFGSNQVNFP
GAGALGVLCLGATTAYGWGEKEKVPIERVMGILWDIFQPLLFGLIGAEVS
IQYLKPDLVGMGLAALGIGLVLRIGVTYFAVLGNSFSTKEKLFCTIAWLP
KATVQAAIGSIPLDKARQVASKDPTDANNQAVEYGIQIVTLAVLAILITA
PLGAIGISLTGPRFLSQRKNEELGEPEANDESDA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041241	XLOC_041241	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00065832	TCONS_00065832	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006153	Cation/H_exchanger

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006812	cation transport
GO:0055085	transmembrane transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0015299	solute:proton antiporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006812	cation transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015299	solute:proton antiporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006153	Cation/H+ exchanger	PFAM	PF00999	Na_H_Exchanger	coord: 113..506 e-value: 6.6E-30 score: 104.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39

Blast

[Close]

BLAST of TCONS_00065832-protein vs. Swiss-Prot (Human)
Match: SL9B2 (Sodium/hydrogen exchanger 9B2 OS=Homo sapiens GN=SLC9B2 PE=1 SV=2)

HSP 1 Score: 403.29 bits (1035), Expect = 1.646e-135
Identity = 217/477 (45.49%), Postives = 301/477 (63.10%), Query Frame = 0

Query:   53 PNHLNVVHRTPAFVKNCCPPRGRFGEYATRIIACIVIWAALYCVVGSSAWVGGNLFSLYLLLVLASLGGFLVAWKTQYFNFPALLGMLI--VGFLLKNIEAINIAKNIDSNWSSSLRQVALAVILLRSGLGLDIAALKRLRFTVLRLAFGPCITEAVTVAVMAHFLLGLPWLWAFQLGFIIGAVSPAVVVPSMLTLQLDGYGVEEGIPTLVMAASSCDDVLAISLFGVFLGVSFSEGNLLWNIFRGPLEIAMGIIGGLLIGSLLWYFPWKKAGNATANRSVLLLAFAFLFLFGSNQVNFPGAGALGVLCLGATTAYGWGEKEKVPIERVMGILWDIFQPLLFGLIGAEVSIQYLKPDLVGMGLAALGIGLVLRIGVTYFAVLGNSFSTKEKLFCTIAWLPKATVQAAIGSIPLDKARQVASKDPTDANNQAVEYGIQIVTLAVLAILITAPLGAIGISLTGPRFLS----QRKNEEL 523
            P   N V R    +   CPP G      T +   +++WA ++ + GS    GGNLF + +L   A +GG L+         P    + +   GFL++NI  IN    I   WSSSLR +AL++IL+R+GLGLD  ALK+L+   +RL+ GPCI EA T A++AH+LLGLPW W F LGF++GAVSPAVVVPSML LQ  GYGVE+G+PTL+MAA S DD+LAI+ F   LG++FS G+ ++N+ RG LE+ +G+  G ++G  + YFP +        R+ L+L  + L +F S    FPG+G L  L +      GW   EK  +E+++ + WDIFQPLLFGLIGAEVSI  L+P+ VG+ +A +GI +++RI  T+  V    F+ KEK+F + AWLPKATVQAAIGS+ LD AR       +    Q  +YG+ ++T+A L+ILITAP+G++ I L GPR L     Q K+EE+
Sbjct:   63 PTEANHVQRLRQML--ACPPHGLLDRVITNVTIIVLLWAVVWSITGSECLPGGNLFGIIILFYCAIIGGKLLGLIKLPTLPPLPSLLGMLLAGFLIRNIPVINDNVQIKHKWSSSLRSIALSIILVRAGLGLDSKALKKLKGVCVRLSMGPCIVEACTSALLAHYLLGLPWQWGFILGFVLGAVSPAVVVPSMLLLQGGGYGVEKGVPTLLMAAGSFDDILAITGFNTCLGIAFSTGSTVFNVLRGVLEVVIGVATGSVLGFFIQYFPSRDQDKLVCKRTFLVLGLSVLAVFSSVHFGFPGSGGLCTLVMAFLAGMGW-TSEKAEVEKIIAVAWDIFQPLLFGLIGAEVSIASLRPETVGLCVATVGIAVLIRILTTFLMVCFAGFNLKEKIFISFAWLPKATVQAAIGSVALDTAR-------SHGEKQLEDYGMDVLTVAFLSILITAPIGSLLIGLLGPRLLQKVEHQNKDEEV 529

The following BLAST results are available for this feature:

BLAST of TCONS_00065832-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00065832-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SL9B2	1.646e-135	45.49	Sodium/hydrogen exchanger 9B2 OS=Homo sapiens GN=S...	[more]

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TCONS_00065832-protein (polypeptide) - C. hemisphaerica