TCONS_00065700-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065700-protein
Unique NameTCONS_00065700-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length340

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065700-protein ID=TCONS_00065700-protein|Name=TCONS_00065700-protein|organism=Clytia hemisphaerica|type=polypeptide|length=340bp
KTYPIRLCATCFANRKYGVMAADTNDVIFGTNLTPKKSLTELNQPQTEKP
LHYTYLKEFRVEQCQLFLQHKCTQHRPFTCFSWHFLNQKRRRPRKKKEGT
FNYSPDVYCQHYNETTGECLSGDDCPFLHRVAGDVERRYHLRYYKTSPCV
YETDQRGYCVKNGPHCAFAHGPHDLRQPVYDVRELQLMENEEKDESGKQI
VPEDPRWNETNYVLANYKTEPCKKPPRLCRQGYACPQYHNNRDRRRSPKK
YKYRSTPCPNVKHSDEWGDPAACENGDSCGYCHTRTEQQFHPEIYKSTKC
NDMQQTGQCPRGPFCAFAHIERKTTILNFHFNAQFFLSDQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041163XLOC_041163Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065700TCONS_00065700Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 294..321
e-value: 2.8E-4
score: 30.2
coord: 216..241
e-value: 4.7
score: 10.9
coord: 252..285
e-value: 1.5
score: 14.8
coord: 104..131
e-value: 0.058
score: 22.5
coord: 143..172
e-value: 3.1
score: 12.3
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 295..319
e-value: 6.6E-6
score: 25.8
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 294..322
score: 12.709
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 252..286
score: 8.465
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 216..242
score: 6.23
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 103..132
score: 11.056
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 143..173
score: 11.084
IPR000571Zinc finger, CCCH-typeSUPERFAMILY90229CCCH zinc fingercoord: 291..322
NoneNo IPR availableGENE3D4.10.1000.10coord: 242..286
e-value: 0.0048
score: 16.1
coord: 135..179
e-value: 8.8E-10
score: 37.7
coord: 87..133
e-value: 1.1E-4
score: 21.3
coord: 287..323
e-value: 5.4E-9
score: 35.2

Blast
[Close]
BLAST of TCONS_00065700-protein vs. Swiss-Prot (Human)
Match: UNK (RING finger protein unkempt homolog OS=Homo sapiens GN=UNK PE=1 SV=2)

HSP 1 Score: 455.292 bits (1170), Expect = 3.091e-155
Identity = 211/301 (70.10%), Postives = 242/301 (80.40%), Query Frame = 0 
Query:   40 TELNQPQTEKPLHYTYLKEFRVEQCQLFLQHKCTQHRPFTCFSWHFLNQKRRRPRKKKEGTFNYSPDVYCQHYNETTGECLSGDDCPFLHRVAGDVERRYHLRYYKTSPCVYETDQRGYCVKNGPHCAFAHGPHDLRQPVYDVRELQLME-----------NEEKDESG-------KQIVPEDPRWNETNYVLANYKTEPCKKPPRLCRQGYACPQYHNNRDRRRSPKKYKYRSTPCPNVKHSDEWGDPAACENGDSCGYCHTRTEQQFHPEIYKSTKCNDMQQTGQCPRGPFCAFAHIER 322
             ++ Q Q EKP HYTYLKEFR EQC LF+QHKCTQHRP+TCF WHF+NQ+RRR  ++++GTFNYSPDVYC  Y+E TG C  GD+CPFLHR  GD ERRYHLRYYKT  C++ETD +G C KNG HCAFAHGPHDLR PVYD+RELQ ME           + E   +G       ++I+ E+PRW ET YVL NYKTEPCKKPPRLCRQGYACP YHN++DRRRSP+K+KYRS+PCPNVKH DEWGDP  CENGD+C YCHTRTEQQFHPEIYKSTKCNDMQQ+G CPRGPFCAFAH+E+
Sbjct:   21 AQVLQAQPEKPQHYTYLKEFRTEQCPLFVQHKCTQHRPYTCFHWHFVNQRRRRSIRRRDGTFNYSPDVYCTKYDEATGLCPEGDECPFLHRTTGDTERRYHLRYYKTGICIHETDSKGNCTKNGLHCAFAHGPHDLRSPVYDIRELQAMEALQNGQTTVEGSIEGQSAGAASHAMIEKILSEEPRWQETAYVLGNYKTEPCKKPPRLCRQGYACPYYHNSKDRRRSPRKHKYRSSPCPNVKHGDEWGDPGKCENGDACQYCHTRTEQQFHPEIYKSTKCNDMQQSGSCPRGPFCAFAHVEQ 321
The following BLAST results are available for this feature:
BLAST of TCONS_00065700-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UNK3.091e-15570.10RING finger protein unkempt homolog OS=Homo sapien... [more]
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