TCONS_00065691-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065691-protein
Unique NameTCONS_00065691-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length694

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065691-protein ID=TCONS_00065691-protein|Name=TCONS_00065691-protein|organism=Clytia hemisphaerica|type=polypeptide|length=694bp
MIFMEKRRIIMLSSSSLFLLLICWWCWEAIGSSSFYKNDEPMIFPLGSDF
VDFRNGSMDSLSAWLRLHPITLVVYYASWSGQCLKAVPEIIKTHNVIRNN
PGLSVVGINCWHSECQKNFNTPHFPRVFLYHTHHRPIEYFDEVLTNKMVE
FLINSIRPFTHIGSANALKRFQQENDNHVLSFMSPTEIPLSRKYKVMLKV
ALQSLTYANTPKIGIITNKDIASTHGLLKHGSVSLNSRFNEKKVYPANFN
YTSQDIINWISANSRKLVNQLTPHIYEREYYTKQLKQPALILTSPTPLSN
LDNGEKLAYYPMLYETATRYYNCSSCYQEKREIIKRSKMLRESVLCRDYI
ILKDFLYLSEHICFNKQSMICGSQNLYTVIDPYLQVTYIRYSTQSGHLSR
RVYRDDYQWCRYRVVSVSFLKKYGLAAGFVENEALKLNRLPKMITLKDIL
HDLNVTEPIVNILSKDSTDTFRCGSNAPCCHKGQSKMPHGSIDGLACRTN
KTLNFYILDAFRYEYLVTKVLGVEHKTNESSIFIVDLQSKTHHLMGREKA
PSALERLILDYTNDNLNPHYPSIPSQQHRQPLHKEIVELSSSSFNKEVLE
NDQNVLVMFYANWCGVCKPANLMFLKLLHQQKDSKVKFARIDNDLHDLPW
HLTASTYPSFILFPAQRKEDSIAFPTDKEMTMENFAQFLSTSLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041157XLOC_041157Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065691TCONS_00065691Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 467..577
e-value: 2.0E-4
score: 20.9
NoneNo IPR availableGENE3D3.40.30.10coord: 161..266
e-value: 2.0E-6
score: 27.5
NoneNo IPR availableGENE3D3.40.30.10coord: 578..694
e-value: 2.0E-18
score: 66.0
NoneNo IPR availableGENE3D3.40.30.10coord: 55..160
e-value: 6.3E-11
score: 41.5
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 586..679
e-value: 1.8E-15
score: 56.6
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 567..694
score: 9.643
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 556..689
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 68..151

Blast
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BLAST of TCONS_00065691-protein vs. Swiss-Prot (Human)
Match: TXD11 (Thioredoxin domain-containing protein 11 OS=Homo sapiens GN=TXNDC11 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.964e-24
Identity = 67/209 (32.06%), Postives = 111/209 (53.11%), Query Frame = 0 
Query:  487 MPHGSIDGLACRTNKTLNFYILDAFRYEYLVTKVLGVEHKTN-ESSIFIVDLQSKTHHLMGREKAPSALERLILDYTNDNLNPHYPS-----IPSQQHRQPLHKEIVELSSSSFNKEVLENDQNVLVMFYANWCGVCKPANLMFLKLLHQQKDSKVKFARIDNDLHDLPWHLTASTYPSFILFPAQRKEDSIAFPTDKEMTMENFAQFL 689
            M   +  GL+CRTNKTLN Y+LD+  + +L  + LG    T  +    IVD++ ++H+++  ++A   L +L L+    N +  Y       I S   + P    I E+++ +F + VL+  Q+VL+++YA WCG C   N +F++L           ARID   +DLPW       P+ + FP  RK+ S+ +P D  +T+ N  +F+
Sbjct:  591 MTSTNFTGLSCRTNKTLNIYLLDSNLF-WLYAERLGAPSSTQVKEFAAIVDVKEESHYILDPKQA---LMKLTLESFIQNFSVLYSPLKRHLIGSGSAQFPSQHLITEVTTDTFWEVVLQK-QDVLLLYYAPWCGFCPSLNHIFIQLARNLPMDTFTVARIDVSQNDLPWEFMVDRLPTVLFFPCNRKDLSVKYPEDVPITLPNLLRFI 794

HSP 2 Score: 103.99 bits (258), Expect = 6.607e-23
Identity = 88/315 (27.94%), Postives = 130/315 (41.27%), Query Frame = 0 
Query:   43 IFPLGSDFVDFRNGSMDSLSAWLRLHPITLVVYYASWSGQCLKAVPEIIKTHNVIRNNPGLSVVGINCW--HSECQKNFNTPHFPRVFLYHTHHRPIEYFDEVLTNKMVEFLINSIRPFTHIGSANALKRFQQENDNHVLSFMSPTEIPLSRKYKVMLKVALQSLT-----------------------------YANTPKIGIITNKDIASTHGLLKHGSVSLNSRFNEKKVYPAN-FNYTSQDIINWISANSRKLVNQLTPHIYEREYYTKQLKQ-PALILTSP-TPLSNLDNGEKLAYYPMLYETATRYYNC 323
             F L S  +D   G +D      R   + L+ +YA W GQ + A  EI +  + + +   +  V INCW    +C+K  +  +FP ++LYH    PIEY   +    + +F+   ++P  +I S + L  F    +  VL +   +  P    Y      AL SL                              Y  T + G+ITNK +A    L+  GSV L+  FN   V+P    NYT+++I  W   N   L   L PH  +      +LK+ PAL L  P  PL+     E       + E A  Y NC
Sbjct:  100 FFSLRSPVLDLFQGQLDYAEYVRRDSEVVLLFFYAPWCGQSIAARAEIEQAASRLSDQ--VLFVAINCWWNQGKCRKQKHFFYFPVIYLYHRSFGPIEYKGPMSAVYIEKFVRRVMKPLLYIPSQSELLDFLSNYEPGVLGYFEFSGSPQPPGYLTFFTSALHSLKKALESTSSPRALVSFTGEWHLETKIYVLDYLGTVRFGVITNKHLAKLVSLVHSGSVYLHRHFNTSLVFPREVLNYTAENICKWALENQETLFRWLRPHGGKSLLLNNELKKGPALFLFIPFNPLA-----ESHPLIDEITEVALEYNNC 407
The following BLAST results are available for this feature:
BLAST of TCONS_00065691-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TXD113.964e-2432.06Thioredoxin domain-containing protein 11 OS=Homo s... [more]
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