TCONS_00065612-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065612-protein
Unique NameTCONS_00065612-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length843

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065612-protein ID=TCONS_00065612-protein|Name=TCONS_00065612-protein|organism=Clytia hemisphaerica|type=polypeptide|length=843bp
MKAMEAEETQHGHSSWNTNGMFARCLREKRATVYDDTNVDDVIEGKRNFC
LEEKLQDDKFTTAKQCLLEMEGKDFNLKYIQEHGFNTPMLFKSKDGLNIT
VPNPDLFSVNDVKSYVGARRIIDVFDCDTHSPEKMTLHQFVRYYMSQEKE
KLLNVTSLEVSQTGLARLVDCPTTITEDLDWVPLVWPKNLIKGQKDATNA
VENMKYPKVRKYCLMSVGGCYTDFHIDFGGTSVWYHVLKGSKVFWLIPPT
DENLEIYERWVLSERQQDVFFGDVVEDCFRIQLVAGDTFMIPTGWIHSVY
TPEDSLVFGGNYLHSFNIPMQLRIHDIEETTHVPKHLRFPFFAEIHWYLV
KMYVEILERDMDERRKLEFEGDDSANEEEDDEKDVFKLINDEMNKKEEDT
EEKSQHSPKSPKPTKWQCVHLTVFELEGLKTLCERLRSWSHAKINYPKDF
GDDSMELLDRLEEMLQYHEEDDQILACSGNNIFKQYAMDKGITTSPKSSP
QKNKSSSITASGSGDEVVDLTSKTSPSPKTSPIKPTSTKANKEDLSPADK
STETLPDKKSSKDSTDESPVVKKKRARRVRVQKKETDEEPPTITTEKRVR
KSPKKFAHKEKEKTVIRRVRCHQCKGCSRENCNKCRFCLDMKKNGGEGKL
RQSCAMRFCENPQLPSYVVCNVCDSREDGELLMECHVCSEVVHPACIERN
NKKDNKKLSKCKISKKVNNSWECPKCCQADEEETTIFSVNAVEKIVNSIK
KENRNVLQPKGGKPAMSKVLLNKIQNGGKGRKKSFDLGSDGSDDEPLAKK
RNRSKAGSENESDDEPLIKKKIKKVQENVTPKPVLNIVLWFVK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041104XLOC_041104Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065612TCONS_00065612Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR003347JmjC_dom
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR002857Znf_CXXC
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 669..727
e-value: 0.0022
score: 27.2
IPR003347JmjC domainSMARTSM00558cupin_9coord: 160..329
e-value: 1.1E-27
score: 107.9
IPR003347JmjC domainPROSITEPS51184JMJCcoord: 157..329
score: 28.765
NoneNo IPR availablePFAMPF13621Cupin_8coord: 131..302
e-value: 5.8E-8
score: 32.7
NoneNo IPR availableGENE3D2.60.120.650coord: 15..315
e-value: 2.9E-29
score: 101.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 777..818
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 395..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 493..609
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 79..356
IPR019787Zinc finger, PHD-fingerPFAMPF16866PHD_4coord: 665..727
e-value: 1.4E-8
score: 34.6
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 667..729
score: 8.947
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 664..750
e-value: 7.5E-7
score: 28.4
IPR002857Zinc finger, CXXC-typePFAMPF02008zf-CXXCcoord: 615..659
e-value: 1.6E-10
score: 40.8
IPR002857Zinc finger, CXXC-typePROSITEPS51058ZF_CXXCcoord: 614..660
score: 11.664
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 660..731

Blast
[Close]
BLAST of TCONS_00065612-protein vs. Swiss-Prot (Human)
Match: KDM2A (Lysine-specific demethylase 2A OS=Homo sapiens GN=KDM2A PE=1 SV=3)

HSP 1 Score: 406.757 bits (1044), Expect = 5.150e-126
Identity = 237/566 (41.87%), Postives = 333/566 (58.83%), Query Frame = 0 
Query:   22 FARCLREKRATVYDDTNV-DDVIEGKRNFCLEEKLQDDKFTTAKQCLLEMEGKDFNLKYIQEHGFNTPMLFKSKDGLNITVPNPDLFSVNDVKSYVGARRIIDVFDCDTHSPEKMTLHQFVRYYMS--QEKEKLLNVTSLEVSQTGLARLVDCPTTITEDLDWVPLVWPKNLIKGQKDATNAVENMKYPKVRKYCLMSVGGCYTDFHIDFGGTSVWYHVLKGSKVFWLIPPTDENLEIYERWVLSERQQDVFFGDVVEDCFRIQLVAGDTFMIPTGWIHSVYTPEDSLVFGGNYLHSFNIPMQLRIHDIEETTHVPKHLRFPFFAEIHWYLVKMYVEILERDMDERRK---------LEFEGDDSAN-EEEDDEKDVFKL----------INDEMN----------------KKEEDTEEKSQHSPKSPKPTKW--QC-------VHLTVFELEGLKTLCERLRSWSHAKINYPKDFGDDSMELLDRLEEMLQYHEEDDQILACSGNNIFKQYAMDK-GITTSPKSSPQKNKSSSITASGSGDEVVDLTSKTSPSPKTSPIKPTST 538
            +++ LR      Y+D  + DD IEGKR F LEEKL  +K+      +  MEGKDFN++YIQ  G   P++FK+ DGL I +P+PD F+VNDVK  VG+RR++DV D +T    +MT+ Q+ RYY +  +E+EKL NV SLE S T L  +V  P+T+ + +DWV  +WP++L + Q ++TNA+  M+YPKV+KYCLMSV GCYTDFH+DFGGTSVWYH+ +G KVFWLIPPT  NLE+YE W+LS +Q D+F GD V DC RI+L  G TF+IP+GWIH+VYTP D+LVFGGN+LHSFNIPMQL+I++IE+ T VP   R+PF+ E+ WY+++ YV  +       ++         LE  G +S N +EE  +++  +L          + + +N                KK    +  S  S  S     W  QC       VHLT FELEGL+ L ++L S    K   P    D+   + D ++ +L+     D  LA +G  I +    DK    T PK    +  +  IT   +            P+P+ +P++P + 
Sbjct:   10 YSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNA--NFVTFMEGKDFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPD-FTVNDVKMCVGSRRMVDVMDVNTQKGIEMTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTV-DFIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLSMDLELNGLESGNGDEEAVDREPRRLSSRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKTLAGDSSSDCSRGSHNGQVWDPQCAPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIAD-VKILLEELANSDPKLALTGVPIVQWPKRDKLKFPTRPKV---RVPTIPITKPHT----------MKPAPRLTPVRPAAA 557

HSP 2 Score: 93.9745 bits (232), Expect = 1.832e-19
Identity = 56/172 (32.56%), Postives = 85/172 (49.42%), Query Frame = 0 
Query:  569 PVVKKKRARRVRVQKKETDEEPPTITTEKRVRKSPKKFAHKEKEKTVIRRVRCHQCKGCSRENCNKCRFCLDMKKNGGEGKLRQSCAMRFCENPQLPSYVVCNVCDSREDGE-------LLMECHVCSEVVHPACIERNNKKDNKKLSKCKISKKVNNSWECPKCCQADEEE 733
            P   K R   + + K  T +  P +T  +    SP     + +           +CK C +  C  C +C DMKK GG G+++QSC +R C  P+LP  V C++C   +  E        LMEC +C+E+VHP C++     D + L    +++++ N WECPKC Q D  E
Sbjct:  525 PTRPKVRVPTIPITKPHTMKPAPRLTPVRPAAASPIVSGARRRRVRC------RKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQ----MDGEGL----LNEELPNCWECPKCYQEDSSE 682
The following BLAST results are available for this feature:
BLAST of TCONS_00065612-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KDM2A5.150e-12641.87Lysine-specific demethylase 2A OS=Homo sapiens GN=... [more]
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