TCONS_00065535-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00065535-protein
Unique Name	TCONS_00065535-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	326

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00065535-protein ID=TCONS_00065535-protein|Name=TCONS_00065535-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
MKITICLVFGLPAVGKTTFCGQLMNHPGHTSLNKYLFTYDDLMSEKLIFE
DENFEGLWKSHRHKVFQNVENCIIQIKTGDYERNVFKELCTCFQNGSTGC
DEHVLFIDDNFFYSSMRYAYYQLARKMACSFCQIFIKAPEDLDLLFKRNK
NRKSSVPEETIRKMSRLFESPDPGLNHWEKNTTSFDCFDLHTNNSDWFSL
KVFDFVNRCSLEIVPPVLTEEEIEERRLNRQKNLENYYHQCDQLLRKHVS
KEMAIAKNEKMMNKNELKELAKLLNDRRKKYLTKIRDGNAIRVDEDEIIL
FDEKWLNTENEKIEMFFKECTLLEEL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041066	XLOC_041066	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00065535	TCONS_00065535	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013641	KTI12/PSTK
IPR027417	P-loop_NTPase

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 257..284
None	No IPR available	GENE3D	3.40.50.300		coord: 4..287 e-value: 6.6E-21 score: 74.7
IPR013641	Protein KTI12/L-seryl-tRNA(Sec) kinase	PFAM	PF08433	KTI12	coord: 104..264 e-value: 1.4E-7 score: 31.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..171

Blast

[Close]

BLAST of TCONS_00065535-protein vs. Swiss-Prot (Human)
Match: PSTK (L-seryl-tRNA(Sec) kinase OS=Homo sapiens GN=PSTK PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 9.986e-27
Identity = 82/287 (28.57%), Postives = 131/287 (45.64%), Query Frame = 0

Query:    2 KITICLVFGLPAVGKTTFCGQLMNH-PGHTSLNKYLFTYDDLMSEKLI--FEDENFEGLWKSHRHKVFQNVENCIIQIKTG-------DYERNVFKELCTCFQN-----------------GSTGCDEHV-LFIDDNFFYSSMRYAYYQLARKMACSFCQIFIKAPEDLDLLFKRNKNRKSSVPEETIRKMSRLFESPDPGLNHWEKNTTSFDCFDLHTNNSDWFSLKVFDFVNRCSLEIVPPVLTEEEIEERRLNRQKNLENYYHQCDQLLRKHVSKEMAIAKNEK 260
            K  +C++ GLPA GK+TF   L +           +  YDD+M +  +           WK  R ++ + +E  ++ +  G       +    ++++  TC ++                   T     + L +DDNF+Y SMRY  YQLARK +  FCQ+F+  P  L+   +RN  R  ++P ETI  M R  E P+P  N WE N+ +       +      SL+V D +   +LE  P    E+ +E++  +R     N  H+ DQ LR+ VS+ M  AK  +
Sbjct:   17 KRGLCVLCGLPAAGKSTFARALAHRLQQEQGWAIGVVAYDDVMPDAFLAGARARPAPSQWKLLRQELLKYLEYFLMAVINGCQMSVPPNRTEAMWEDFITCLKDQDLIFSAAFEAQSCYLLTKTAVSRPLFLVLDDNFYYQSMRYEVYQLARKYSLGFCQLFLDCP--LETCLQRNGQRPQALPPETIHLMGRKLEKPNPEKNAWEHNSLTIPSPACASEA----SLEVTDLL-LTALE-NPVKYAEDNMEQKDTDRIICSTNILHKTDQTLRRIVSQTMKEAKGNQ 295

The following BLAST results are available for this feature:

BLAST of TCONS_00065535-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00065535-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PSTK	9.986e-27	28.57	L-seryl-tRNA(Sec) kinase OS=Homo sapiens GN=PSTK P...	[more]

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TCONS_00065535-protein (polypeptide) - C. hemisphaerica