TCONS_00065462-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065462-protein
Unique NameTCONS_00065462-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length107

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065462-protein ID=TCONS_00065462-protein|Name=TCONS_00065462-protein|organism=Clytia hemisphaerica|type=polypeptide|length=107bp
MAATKSPFLKNAPASLPDEPPRRMIATQQEMMDAQVPLRFRDFCAHLYIP
LMQCRYETSKAPWKCKEEKHEWEECEMADYYRRMRDKYRETLKKQAEEKA
AAAAESS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041024XLOC_041024Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065462TCONS_00065462Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008698NADH_UbQ_OxRdtase_B18_su
Vocabulary: Molecular Function
TermDefinition
GO:0008137NADH dehydrogenase (ubiquinone) activity
GO:0003954NADH dehydrogenase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003954 NADH dehydrogenase activity
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePROSITEPS51808CHCHcoord: 41..83
score: 10.53
IPR008698NADH:ubiquinone oxidoreductase, B18 subunitPFAMPF05676NDUF_B7coord: 25..85
e-value: 1.8E-27
score: 94.7

Blast
[Close]
BLAST of TCONS_00065462-protein vs. Swiss-Prot (Human)
Match: NDUB7 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Homo sapiens GN=NDUFB7 PE=1 SV=4)

HSP 1 Score: 76.2554 bits (186), Expect = 3.241e-19
Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 0 
Query:   15 SLPDEPPRRMIATQQEMMDAQVPLRFRDFCAHLYIPLMQCRYETSKAPWKCKEEKHEWEECEMADYYRRMRDKYRE 90
              P+   R M+ATQQEMMDAQ+ L+ RD+CAH  I L++C+ ++      CK+E+H+W+ CE  DY  RM++  RE
Sbjct:   30 GFPERKEREMVATQQEMMDAQLRLQLRDYCAHHLIRLLKCKRDSFPNFLACKQERHDWDYCEHRDYVMRMKEFERE 105
The following BLAST results are available for this feature:
BLAST of TCONS_00065462-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NDUB73.241e-1946.05NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
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