TCONS_00065424-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065424-protein
Unique NameTCONS_00065424-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2217

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065424-protein ID=TCONS_00065424-protein|Name=TCONS_00065424-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2217bp
MFGQPSPRRELPSSSAASLFGGGGNMSNGLSQFDQVQFDSFVNETPSTSL
TQSLPPGPQSGPPPIPRAGPQSLDGATANPYRSKGRGGGRTGRQYNTASS
LFGSSNPPAAQQFPQPTQTPSPSNPQLFPPPQPSVSTGAVSTPSPSQPTG
FDVASTFQTTSQNNTTATVTPDYFGAMQHPNASTSTNEITPSLMNISQPT
AFDQYESTKISAEKQRKAEEENDRLRAEKQARRAETMKRINKDREKRIAE
QNKQLEEINRSAAPPPTDASSSSSKARTKEERKELRERARKARMKRGDRS
SANASGDLSSLIDEVSSRGGSICSDLSSDQIRDPNSLNSSHNQANFYNNP
YGSVQRPPVAPSSQPELRDSLPNNTASHLFGSSSTYPNQPPPAVDQPLPQ
TNTTSANNMFSTDTNPHNNFYDNPEGGPSRDNFHGYQSVEPQQSNQNVHN
YAATNSGAGFFDNMRNNDSKDNASFPPQNAQQPLPKHDYFEPTPSNDRVQ
PSTEQQAQNTDVYAHYNYSGPDYNETNTVPNEPPKTDHQEESGESSASSG
SASSYAMVSSVKSSESESRLSPYQFVDSNVYPTQSSLNSAESSPLEIQNV
STASATYDKVSMPSGSISMSSFEMTGGSSGSEIPLYSTSSVIEAIEEASE
PLPETQPPPPPAAQVVEQSSLVQENKKIFQKAAALFEEAKSLSSDESLSM
EHHTFSDPNSPNPSVPPQSFSAPLHQDTPPMTAQQPPPMDQPPVNQQMAI
PDPVDHHQLPAAQPPFGQQPPSVAQPQPPPMGAMYSPRVDNELPSGPNLQ
NLVNNDQAHVPLVNNSYAQPPPMVNNEPTQPPPEPFQYQQQVINDALETP
AQNPSPYPPEPLPEAVQAAQSPPDVIPSVPSHATEAVQQLPSSAQPEVLQ
QIPQIQQNYNHPEFLPPEADPVHPIQEPELLSQAIAPSPNALPDLQPDGY
QPIVSQHAPVSPNALPGMVSQYPPEQDGSVQQPSHQPPLFPGQQVNPNLP
AEQIQQSPLQINNPLVPPQGPIEQRPFEQPLTVNQPPTLPQEPQATIYDS
NQSVPFPQPGVQPPNQLFGQPPPAPHVPSELPLQQPPPPVNQQLPPNTLQ
QPQNIAQPNQISPMLQQAPPPTAPIQPPAFYPGSSQPFSQSSSVSASQSV
SQTSIVSDNPPYGGMPQYPLPSASNTSIVSQYSVQEVPRVNPLQTNSVNN
FSHPIVSPQASNSSVNTVISQPGTQAQPLPQGAPILSPRPDPIADTSVLN
EEVSIQDSTIDDLFGGPNSKLKPKQRAGKTMADQRFNQQVVAALDTYQQQ
QDEVVQQSPLNSLTSPINSLTSPINSLPSTDLNPNQPKTQNPYVEHQSVA
QLQQNLSATPQIQPVAQQPQTVAQQVQQPFHQPVDQYNQQQPMQMVAQQP
PQQTLQQPLSTQQPMATLQQQPINPQQPSMGTQPLPVPNVTQNPVLPQQP
MMQQTPQNVPQPPTTPTLPQMPQYPGMMPQQPGMFGQQYPQQPAQQQMTQ
EQQNMMLQYYQSMGYTPQQAQQYVQQYQYDPTGGMGGYGNDYYSQMWYHQ
QMQQQQQYMNMYYHSMWNAYNSYPSSVSSSTYGDSRPGSVIEKRSSISSD
QVLSELGDLTSELSFPNRSDTPPPEEVIKQRSTPLCFTRPHIKACFSKTG
GLLNVVAPRQPLDGEVAVVQNVSIENIVGIPILKRFPGPLLRGDTNKKQI
SKFIVETIRVHLPQRYGDDPHQLFAHVALWEFVGLLVKQNGTFDGSDIAD
MLINLLPIVHDQQHGRETKGFGKLCNPIQVPDNSAVEELEMLLATGRMKD
ALDHAMQAGLWGRAFMLGTLMGHKYLGSVQTKFTSSINKKDAIKTLFNHL
SNKDPTSMKKRVNKDTWVQNLCMLISQPTGHVDNDRKKILCFGDGLRDLG
LVAASHICYIIANVPFGSHKNTECRMSLLGLEHKTYTDKSAAVWADPLNI
QLTEIYQYARTLHDKSFIVPSFQSYKYQYAMTLVDYGYAPQSMAYLESIG
QAIISDRSCELFSKELCQNITKHASRILIQDADRYEDVEMPEWVQKVQGY
STKANITPALQSSNNIPPPVSARSQASIPELPFSPILPDTSRSDEISSDA
IPSDPIRQEAPIYQPTPAASNTSVHQNNEWDNVPAAEPEQPWQPPQQQPW
QPEDVDRVDHYSHEQHQPDYQQTTEPYTGYGQNYDNSYQQPVPSQQYEET
GYSNEVSPRYDHYEPAX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041001XLOC_041001Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065424TCONS_00065424Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024298ACE1_Sec16_Sec31
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 202..237
NoneNo IPR availableCOILSCoilCoilcoord: 241..261
NoneNo IPR availableCOILSCoilCoilcoord: 275..295
NoneNo IPR availableCDDcd09233ACE1-Sec16-likecoord: 1686..2027
e-value: 4.94454E-68
score: 233.689
IPR024298Ancestral coatomer element 1, Sec16/Sec31PFAMPF12931Sec16_Ccoord: 1790..2028
e-value: 5.2E-31
score: 108.3

Blast
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BLAST of TCONS_00065424-protein vs. Swiss-Prot (Human)
Match: SC16A (Protein transport protein Sec16A OS=Homo sapiens GN=SEC16A PE=1 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 1.847e-48
Identity = 141/509 (27.70%), Postives = 237/509 (46.56%), Query Frame = 0 
Query: 1579 SSTYGDSRPGSVIEKRSSISSDQVLSELGDLTSELSFPNRSDTPPPEEVIKQRSTPLCFTRPHIKACFSKTGGLLNVVAPRQPLDGEVAVVQNVSIENIVGIPI----LKRFPGPLLRGDTNKKQISKFIVETIRVHLPQRYGDDPHQLFAHVALWEFVGLLVKQNGTFDGSDIADMLI----------------NLLPIVHDQ------------QHGRETKGFGKLCNPIQVPDNSAVEELEMLLATGRMKDALDHAMQAGLWGRAFMLGTLMGHKYLGSVQTKFTSSINKKDAIKTLFNHLSNKDPTSMKKRVNKD--TWVQNLCMLISQPTGHVDNDRKKILCFGDGLRDLGLVAASHICYIIANVPFGSHKNTECRMSLLGLEHKTYTDKSAAVWADPLNIQLTEIYQYARTLHDKSFIVPSFQSYKYQYAMTLVDYGYAPQSMAYLESIGQAIISDRSCELFSKELCQNITKHASRILIQD-----ADRYEDVEMPEWVQKVQ 2048
             S +GD   G+    RS+ SS     E G       +P  +  P  E+V  + ++P  F+ PH+ A F   G L+ V+ P  P +G+ A+V+  S+E ++        ++ FPGPL + DT+K  +  F        L      D     +   LW F+ LL +QNGT  G+DIA++L+                NL+   ++             Q    T G     + ++       E    LL  GR KDAL+ AM+ GLWG A +L + M  +    V T+F +S+   D ++T++  +S + P +     ++    W  +L M++S    ++D + + +   GD L   GL+ A+H CY++A   FG +     ++ L+G  H     K A   A    IQ TE Y+YA++L  ++  +PSFQ +K+ Y+  L + G A Q+  Y E+I ++I++     L+S  L   + + AS++ + D         E +  P W+  +Q
Sbjct: 1219 GSFHGDFAYGTY---RSNFSSGPGFPEYG-------YPADTVWPAMEQVSSRPTSPEKFSVPHVCARFGPGGQLIKVI-PNLPSEGQPALVEVHSMEALLQHTSEQEEMRAFPGPLAKDDTHKVDVINFAQNKAMKCLQNENLIDKE---SASLLWNFIVLLCRQNGTVVGTDIAELLLRDHRTVWLPGKSPNEANLIDFTNEAVEQVEEEESGEAQLSFLTGGPAAAASSLE----RETERFRELLLYGRKKDALESAMKNGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLNNNMDVESRTMATMGDTLASRGLLDAAHFCYLMAQAGFGVYTKKTTKLVLIGSNHSLPFLKFATNEA----IQRTEAYEYAQSLGAETCPLPSFQVFKFIYSCRLAEMGLATQAFHYCEAIAKSILTQP--HLYSPVLISQLVQMASQLRLFDPQLKEKPEEESLAAPTWLVHLQ 1703
The following BLAST results are available for this feature:
BLAST of TCONS_00065424-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SC16A1.847e-4827.70Protein transport protein Sec16A OS=Homo sapiens G... [more]
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