TCONS_00064967-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064967-protein
Unique NameTCONS_00064967-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length986

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064967-protein ID=TCONS_00064967-protein|Name=TCONS_00064967-protein|organism=Clytia hemisphaerica|type=polypeptide|length=986bp
MATLSSTVTPILKYWNQEEKFSSVAKARSSNDGSFLALNVENNILVVAHC
RCSKEDVLSTETNNFVWGASSLHSDRVLDSPTQSQFLYIVDHELNITVFE
LNISKDTLNYSIVTLIGSSFLLATKDIRELGDLSLVSASVDSQGETHSVI
CLVNKQYIAQIMISKTNEPFVQEMMQVCKEDVLGSNDVTHAKRVEDIIFC
ISEQLVLYAIAAQTLEVVLQMNLQDKLLLYDVQHLDATFDSTQFKLVLID
ESLQIHSIHIHKSLLLGNSPDSSNKKWPNIWSYRVGHMSDSKKIGKRRRK
MKHSSIEVSTTPAEESMRDLTCDNLVASNTSIMMILKPKNRHELEQENKQ
CLVYFNTMDNTFNSLDLDTETCLCYSNNPHFPTLLISIHSITIPTFNANQ
EQLIDTIIQYSGIDQAEVICKTNNWDQFSIPLHTLEVGLQHRQFETVAFF
LKSREKVFTRYWRSVGELSSSFNAGGGGSPSKSFTSQRSYTENINSDEMV
SAIEMLMKSLKSCSTGKHKQNFFESLLKLCSSYFNDLIQDGIFALEMESY
HSKEDLPILRSNSTTSDPGEYGFNFLHNIPDAMKYITEKLIMIRKYLNIK
TSRKTNDEDVVDGIPKRQKLDQEESLEEMLLSGNISSLQKTLFTKSNVCN
GSFESLLDYGVEVATKCLKQNQIDKAEIVLLNLGLNPKKEIKKLYMITLE
RELRIKLYPYLKKEHLLTQDDQKDYEYLQELESIYVSEDYTVVLQNHNFK
WNVEEKHDQNENQDNETQNSLAYSSLSLEHVSNLDQETKRQIIVEGHYIT
SALDSIKKEDGDQLWKYLLRHNHVSIMVDLLSGKCDQFISTDFPANLLSN
EETLPTYTREVVINSLVRCGYYPKHLLVDLSLLMKYLCQNDCLFADQHPM
VFYKHQLSDGERKELLKSFNQYFVKFCENNDLPLLLWKFVVHYNLDVEQI
KLEGSIKSWIPFLLSFHHLVRTKGILILIISFHQNF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040736XLOC_040736Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064967TCONS_00064967Clytia hemisphaericatranscript
Blast
[Close]
BLAST of TCONS_00064967-protein vs. Swiss-Prot (Human)
Match: SPTCS (Spatacsin OS=Homo sapiens GN=SPG11 PE=1 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 3.146e-26
Identity = 141/629 (22.42%), Postives = 269/629 (42.77%), Query Frame = 0 
Query:  358 MDNTFNSLDLDTETCLCYS-NNPHFPT---------LLISIHSITIPTFNANQEQLIDTIIQYSGIDQAEVICKTNNWDQFSIPLHTLEVGLQHRQFETVAFFLKSREKVFTRYWRSVGELSSSFNAGGGGSPSKSFTSQRSYTENINSDEMVSAIEMLMKSLKSCSTGKHKQNFFESLLKLCSSYFNDLIQDGIFALEMESYHSKEDLPILRSNSTTSDPGEYGFNFLHNIPDAMKYITE-KLIMIRKYLNIKTSRKTNDEDVVDGIPK------RQKLDQEESLEEMLLSGNISSLQKTLFTKSNVCNGSFESLLDYGVEVATKCLKQNQIDKAEIVLLNLGLNPKKEIKKLYMITLERELRIKLYPYLKKEHLLTQDDQKDYEYLQELESIYVSE-DYTVVLQNHNFKWNVEE---KH----DQNENQDNETQNSLAYSSLSLEHVSNLDQETKRQIIVEGHYITSALDSIKKEDGDQLWKYL-LRHNHVSIMVDLLSGKCDQFISTDFPANLLSNEETLPT------------YTREVVINSLVRCGYYPKHLLVDLSLLMKYLCQNDCLFADQHPMVFYKHQLSDGERKELLKSFNQYFVKFCENNDLPLLLWKFVVHYNLDVE 948
            M  T    DL+T+   C+S      P           +++ + +++  F   QE+ ++ ++ +      + +C  N W + SIP+H LE G+++RQ +TV FFLKS+E +              FN     S S  F    S+    N +E++ A+++L  +++   +    ++F E LL L  S+ N+ I++     E    H ++ + IL S                       YI E +  MI+     K +   ++ DV + +PK       +KL  EE +   +L+  I   Q T F   +      E L+  G+ +    LK+N I +A  +L N+G + K ++ K+   T  + +R  L   LK+++  ++ +++  +++ ++E +Y+      + +Q+    W  E+   KH    D     D + + +     + L      DQ T+  I++       + +  K    + LW+YL  RH+ ++I++ +      +F +    A+L  N+  L T            Y R  +++ L R G +    L D    +  L +   +  D  P+  YK +  +G        F+  F+ +C  + L  LL+ ++  Y L  E
Sbjct:  446 MGYTITLWDLETQGMQCFSLGTKCIPVDSSGDQQLCFVLTENGLSLILFGLTQEEFLNRLMIHGSASTVDTLCHLNGWGRCSIPIHALEAGIENRQLDTVNFFLKSKENL--------------FNPSSKSSVSDQFDHLSSHLYLRNVEELIPALDLLCSAIRESYSEPQSKHFSEQLLNLTLSFLNNQIKELFIHTEELDEHLQKGVNILTS-----------------------YINELRTFMIK--FPWKLTDAIDEYDVHENVPKVKESNIWKKLSFEEVIASAILNNKIPEAQ-TFFRIDSHSAQKLEELIGIGLNLVFDNLKKNNIKEASELLKNMGFDVKGQLLKICFYTTNKNIRDFLVEILKEKNYFSEKEKRTIDFVHQVEKLYLGHFQENMQIQSFPRYWIKEQDFFKHKSVLDSFLKYDCKDEFNKQDHRIVLNWALWWDQLTQESILLP----RISPEEYKSYSPEALWRYLTARHDWLNIILWI-----GEFQTQHSYASLQQNKWPLLTVDVINQNTSCNNYMRNEILDKLARNGVFLASELEDFECFLLRLSRIGGVIQDTLPVQNYKTK--EG------WDFHSQFILYCLEHSLQHLLYVYLDCYKLSPE 1017
The following BLAST results are available for this feature:
BLAST of TCONS_00064967-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPTCS3.146e-2622.42Spatacsin OS=Homo sapiens GN=SPG11 PE=1 SV=3[more]
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