TCONS_00064769-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00064769-protein
Unique Name	TCONS_00064769-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	126

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00064769-protein ID=TCONS_00064769-protein|Name=TCONS_00064769-protein|organism=Clytia hemisphaerica|type=polypeptide|length=126bp
MNHFWNWTHFNDYLKSIILFSLFGCIITFCFANYPVYLETLGFVSVFTEA
MLGAPQFYRNFKNKSTTGMSVKMVGMWFCGDTFKTGYFVIKNAPVQFGIC
GLLQVTIDMSILYQVFHYGRKRTTKD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040615	XLOC_040615	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00064769	TCONS_00064769	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006603	PQ-loop_rpt

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006603	PQ-loop repeat	SMART	SM00679	ctns	coord: 51..82 e-value: 1.9E-6 score: 37.4
IPR006603	PQ-loop repeat	PFAM	PF04193	PQ-loop	coord: 38..96 e-value: 3.3E-18 score: 65.1

Blast

[Close]

BLAST of TCONS_00064769-protein vs. Swiss-Prot (Human)
Match: PQLC1 (PQ-loop repeat-containing protein 1 OS=Homo sapiens GN=PQLC1 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.521e-43
Identity = 60/119 (50.42%), Postives = 88/119 (73.95%), Query Frame = 0

Query:    2 NHFWNWTHFNDYLKSIILFSLFGCIITFCFANYPVYLETLGFVSVFTEAMLGAPQFYRNFKNKSTTGMSVKMVGMWFCGDTFKTGYFVIKNAPVQFGICGLLQVTIDMSILYQVFHYGR 120
            +HFW W+ F+DY++ ++ F+     IT+   +  +++ETLGF++V TEAMLG PQ YRN +++ST GMS+KMV MW  GD FKT YF++K AP+QF +CGLLQV +D++IL Q + + R
Sbjct:  135 HHFWQWSSFSDYVQCVLAFTGVAGYITYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNHRHQSTEGMSIKMVLMWTSGDAFKTAYFLLKGAPLQFSVCGLLQVLVDLAILGQAYAFAR 253

The following BLAST results are available for this feature:

BLAST of TCONS_00064769-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00064769-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PQLC1	1.521e-43	50.42	PQ-loop repeat-containing protein 1 OS=Homo sapien...	[more]

You are here

TCONS_00064769-protein (polypeptide) - C. hemisphaerica