TCONS_00064039-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00064039-protein
Unique Name	TCONS_00064039-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	520

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00064039-protein ID=TCONS_00064039-protein|Name=TCONS_00064039-protein|organism=Clytia hemisphaerica|type=polypeptide|length=520bp
MKLFSPLTILFCLSLGYFSGFSYFLSLFGRWFADSIFGRFHAIFGSVLFY
NIGNAGIVVIAYIMKKENYDYYPHFFIISLIFISLGASGMKANISTFAAR
QVIHFGDIHVRKLFNRFYWLINFAAVISCTFVAYLQLQDFLYGYLPGLCG
TVLATIIFICSKRYFVIKRSNGSHLTDIFNIVTQSIKRKYKFQKSISEEI
PKHTTLDLLEYGHIMFGGSYSTDQIDIVRSFSRILLIFMTLLVYWTIYFQ
MPSVFFFQSHFFDLKIRGFQIPASAMNLFDTFSILLMIQIMEHLVYPFFQ
YVNIHLTTLRRMGFGFFLVTLSMVYAALIEPYRRQNVDFQNTNIIMNTTF
HCSNYTVLWQAPQFVLIGFSEFFTSISGLEFAYSQSPRYLQGIVMSLFLT
TSGLGAFLGALIVKLTSVYKKEWLCENINKCSLEYYYYLLAGLSLLNLLI
FMVVSKNFSYSVPFIGTISHSRSSRSLATPTDISDITDLASDANGVSSRI
DLSRQSSFEDVDSISRSSND

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040151	XLOC_040151	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00064039	TCONS_00064039	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000109	POT_fam
IPR020846	MFS_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000109	Proton-dependent oligopeptide transporter family	PFAM	PF00854	PTR2	coord: 42..420 e-value: 9.7E-70 score: 235.3
None	No IPR available	GENE3D	1.20.1250.20		coord: 225..462 e-value: 1.4E-8 score: 33.8
None	No IPR available	GENE3D	1.20.1250.20		coord: 4..194 e-value: 0.004 score: 15.8
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 214..455 coord: 15..170

Blast

[Close]

BLAST of TCONS_00064039-protein vs. Swiss-Prot (Human)
Match: S15A4 (Solute carrier family 15 member 4 OS=Homo sapiens GN=SLC15A4 PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 2.430e-71
Identity = 160/513 (31.19%), Postives = 255/513 (49.71%), Query Frame = 0

Query:   18 FSGFSYFLSLFGRWFADSIFGRFHAIF--------------------------GSVLFYNIGNAGIVVIAYIMKKENYDYYPHFFIISLIFISLGASGMKANISTFAARQVIHFGDIHVRKLFNRFYWLINFAAVISCTFVAYLQLQ-DFLYGY-LPGLCGTVLATIIFICSKRYFVIKRSNGSHLTDIFNIVTQSI---KRKYKFQKS-----ISEEIPKHTTLDLLEYGHIMFGGSYSTDQIDIVRSFSRILLIFMTLLVYWTIYFQMPSVFFFQS------HFFDLKIRGFQIPASAMNLFDTFSILLMIQIMEHLVYPFFQYVNIHLTTLRRMGFGFFLVTLSMVYAALIEPYRRQNVDFQNTN-IIMNTTFHCSNYTVLWQAPQFVLIGFSEFFTSISGLEFAYSQSPRYLQGIVMSLFLTTSGLGAFLGALIVKLTSVYKKEWLCE-----NINKCSLEYYYYLLAGLSLLNLLIFMVVSKNFSYSVPFIGTISHSRSSRSLATPTD 482
            F G +Y  S FG W AD+  GR  AI                           GS    N    G    A       +          L+ + LG + +KANI+ F A QV   G    R+ FN FYW IN  A++S   +AY+Q    F+ GY +P +C   LA ++F+C +  F+ K  +GS  TD+F I+T S    KR  + Q +     + ++  K +  D  +  H   GG ++ ++++ V++  +I+ +F+ L+ YWT+YFQM + +  QS         ++      +PA+ + +FD   ILL+I + + LV P  +   +  ++L+R+  G F V  S   A ++E  R   V  +  N  I N  +H ++ ++ WQ PQ++LIG SE F SI+GLEFAYS +P+ +Q  +M LF   SG+G+F+G+ ++ L S+    W+       NIN C L YY++LLA +    LL+F+++S  + +         H R SR+   PT 
Sbjct:   81 FMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPLLAAPATRAALCGSARLLNCTAPGPDAAARCCSPATF--------AGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVC-VGLAFVVFLCGQSVFITKPPDGSAFTDMFKILTYSCCSQKRSGERQSNGEGIGVFQQSSKQSLFDSCKMSH---GGPFTEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVKEKTINQTIGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALVSIKAIGWMSSHTDFGNINGCYLNYYFFLLAAIQGATLLLFLIISVKYDHHR------DHQR-SRANGVPTS 574

The following BLAST results are available for this feature:

BLAST of TCONS_00064039-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00064039-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S15A4	2.430e-71	31.19	Solute carrier family 15 member 4 OS=Homo sapiens ...	[more]

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TCONS_00064039-protein (polypeptide) - C. hemisphaerica