TCONS_00063719-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063719-protein
Unique NameTCONS_00063719-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length253

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063719-protein ID=TCONS_00063719-protein|Name=TCONS_00063719-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MAVSSGALAGKISLVTGAATGIGRAVCELFAKEGATVIGVGLQNISPVIE
NLPKNTNLPHLALECDVSSEESIKQTFAEILKEYNQTPTIAVNSAGITKD
SFLIKQSEKDFDDVINVNLKGTFFITKHLCGYLIKNKVSGGSIVNIASIV
GKTGNIGQANYTASKAGVVGLTKTTALELARFNVRCNAVLPGFITTAMTD
KVPQPVRDQVCKMIPMQTFGQPQDIAEACLFLASDKSRYITGTTLEVAGG
LGA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039942XLOC_039942Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063719TCONS_00063719Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 215..235
score: 37.3
coord: 161..180
score: 48.91
coord: 86..97
score: 35.66
coord: 135..151
score: 35.83
coord: 182..199
score: 39.45
coord: 12..29
score: 44.81
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 141..149
score: 56.5
coord: 86..97
score: 38.36
coord: 161..180
score: 44.17
NoneNo IPR availableGENE3D3.40.50.720coord: 45..253
e-value: 9.8E-60
score: 201.6
coord: 3..44
e-value: 6.4E-8
score: 31.5
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 17..251
e-value: 1.3E-62
score: 211.3
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 148..176
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 10..251

Blast
[Close]
BLAST of TCONS_00063719-protein vs. Swiss-Prot (Human)
Match: DHB8 (Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens GN=HSD17B8 PE=1 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 2.010e-76
Identity = 123/254 (48.43%), Postives = 161/254 (63.39%), Query Frame = 0 
Query:    8 LAGKISLVTGAATGIGRAVCELFAKEGATVIGVGLQNIS----------PVIENLPKNTNLPHLALECDVSSEESIKQTFAEILKEYNQTPTIAVNSAGITKDSFLIKQSEKDFDDVINVNLKGTFFITKHLCGYLIKNKVSGGSIVNIASIVGKTGNIGQANYTASKAGVVGLTKTTALELARFNVRCNAVLPGFITTAMTDKVPQPVRDQVCKMIPMQTFGQPQDIAEACLFLASDKSRYITGTTLEVAGGL 251
            L   ++LVTGA +GIGRAV    A EGATV    L   +          P  +  P   N  H A + DVS   + +    ++   +++ P++ V+ AGIT+D FL+  SE D+D VI VNLKGTF +T+     L+ N   G SI+NI+SIVGK GN+GQ NY ASKAGV+GLT+T A EL R  +RCN+VLPGFI T MT KVPQ V D++ +MIPM   G P+D+A+   FLAS+ S YITGT++EV GGL
Sbjct:    9 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN--HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRG-SIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGL 259
The following BLAST results are available for this feature:
BLAST of TCONS_00063719-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHB82.010e-7648.43Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens ... [more]
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