TCONS_00063263-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063263-protein
Unique NameTCONS_00063263-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length190

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063263-protein ID=TCONS_00063263-protein|Name=TCONS_00063263-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
MADRQDGYGFTAECQEIIQGKWNQDLADQAAAWISSYVPALAKASYSPAD
LQEKLKDGQILCALANAIVPESILRVNTNKMAFKQMENIGKFLAFCEEFG
CLRTDLFQTVDLYEGVNMPTVVNGIIALGRKVSAKGGRGIGPKESAKNTR
NFSEEQIRQGRDAQIGLQAGTNKFANQSGQNFGKTRAILD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039646XLOC_039646Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063263TCONS_00063263Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003096SM22_calponin
IPR001715CH-domain
IPR000557Calponin_repeat
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003096Smooth muscle protein/calponinPRINTSPR00888SM22CALPONINcoord: 152..165
score: 28.57
coord: 3..17
score: 28.24
coord: 22..35
score: 19.75
coord: 166..181
score: 61.03
coord: 100..115
score: 51.1
coord: 51..66
score: 54.04
coord: 121..135
score: 29.8
coord: 84..100
score: 42.56
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 26..128
e-value: 1.6E-15
score: 67.6
IPR001715Calponin homology domainPFAMPF00307CHcoord: 28..131
e-value: 2.9E-19
score: 69.2
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 21..174
e-value: 1.7E-30
score: 105.3
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 24..132
score: 14.753
IPR001715Calponin homology domainCDDcd00014CHcoord: 50..131
e-value: 6.2109E-19
score: 77.3511
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 17..174
IPR000557Calponin repeatPFAMPF00402Calponincoord: 165..188
e-value: 1.4E-10
score: 40.5
IPR000557Calponin repeatPROSITEPS01052CALPONIN_1coord: 165..183
IPR000557Calponin repeatPROSITEPS51122CALPONIN_2coord: 165..189
score: 11.405

Blast
[Close]
BLAST of TCONS_00063263-protein vs. Swiss-Prot (Human)
Match: TAGL3 (Transgelin-3 OS=Homo sapiens GN=TAGLN3 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 2.272e-38
Identity = 80/202 (39.60%), Postives = 116/202 (57.43%), Query Frame = 0 
Query:    1 MADRQDGYGFTAECQEIIQGKWNQDLADQAAAWISSYVPALAKASYSP---ADLQEKLKDGQILCALANAIVP---ESILRVNTNKMAFKQMENIGKFLAFCEEFGCLRTDLFQTVDLYEGVNMPTVVNGIIALGRKVSAK------GGRGIGPKESAKNTRNFSEEQIRQGRDAQIGLQAGTNKFANQSGQN-FGKTRAIL 189
            MA+R   YG + E QE I+ K++ DL ++   WI   +       + P   A  Q+ L DG +LC L N++ P   E I +++ +KMAFKQME I +FL   E +G   TD+FQTVDL+EG +M  V   ++ALG     K      G      +++ +N R FSEEQ+RQG++  IGLQ G+NK A+Q+G   +G  R I+
Sbjct:    1 MANRGPSYGLSREVQEKIEQKYDADLENKLVDWI--ILQCAEDIEHPPPGRAHFQKWLMDGTVLCKLINSLYPPGQEPIPKISESKMAFKQMEQISQFLKAAETYGVRTTDIFQTVDLWEGKDMAAVQRTLMALGSVAVTKDDGCYRGEPSWFHRKAQQNRRGFSEEQLRQGQNV-IGLQMGSNKGASQAGMTGYGMPRQIM 199
The following BLAST results are available for this feature:
BLAST of TCONS_00063263-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAGL32.272e-3839.60Transgelin-3 OS=Homo sapiens GN=TAGLN3 PE=1 SV=2[more]
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